iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	35.53	4.00e-09	60.10	IUUC-Ath-007327
ULD/UDP/UFD/RAWUL	31.40	1.00e-32	139.00	IUUC-Hsa-046308
E3 activity/RING/RING	29.76	1.00e-07	48.50	IUUC-Ots-000012

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MTRKRPALAE PVSSSRSRVT RRSTTGAPSS KKKRSPEPES DADSEDDYDG PSTSQTKKLK 60
RGNSSTNRGK AANKTKRGSF QVKQEIMDDD ENEEKIDGEV ENGITSREHS PDPSTFKKTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTCGAA AAAGACCAGC TCTTGCAGAA CCGGTTTCAT CTTCTCGATC ACGGGTAACG 60
AGAAGATCAA CAACAGGTGC ACCTTCTTCA AAAAAGAAGC GTTCACCTGA ACCGGAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0033522--P:histone H2A ubiquitination
GO:0040027--P:negative regulation of vulval development
GO:0045138--P:nematode male tail tip morphogenesis
GO:0048841--P:regulation of axon extension involved in axon guidance
GO:0030334--P:regulation of cell migration
GO:0046662--P:regulation of oviposition
GO:0000003--P:reproduction

KEGG

cel:CELE_F11A10.3

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000877	Aegilops tauschii	30.77	1.00e-08	53.10
IUUC-Aml-002400	Ailuropoda melanoleuca	32.64	9.00e-35	138.00
IUUC-Atr-002463	Amborella trichopoda	33.71	3.00e-08	52.00
IUUC-Apl-003757	Anas platyrhynchos	30.36	2.00e-23	101.00
IUUC-Aca-004484	Anolis carolinensis	33.47	2.00e-36	144.00
IUUC-Aly-005422	Arabidopsis lyrata	31.71	5.00e-10	57.80
IUUC-Ath-007327	Arabidopsis thaliana	35.53	2.00e-10	58.90
IUUC-Acl-008013	Aspergillus clavatus	46.88	9.00e-06	44.70
IUUC-Ani-009293	Aspergillus nidulans	46.88	2.00e-05	43.50
IUUC-Ame-011838	Astyanax mexicanus	34.30	3.00e-36	143.00
IUUC-Bta-012853	Bos taurus	31.60	3.00e-32	130.00
IUUC-Bci-013931	Botrytis cinerea	37.93	7.00e-06	45.40
IUUC-Bdi-015045	Brachypodium distachyon	34.52	4.00e-11	61.60
IUUC-Bol-016091	Brassica oleracea	32.94	3.00e-09	55.10
IUUC-Bra-017953	Brassica rapa	29.47	5.00e-07	47.80
IUUC-Cja-019195	Callithrix jacchus	33.77	1.00e-35	141.00
IUUC-Cfa-021121	Canis familiaris	33.88	2.00e-35	140.00
IUUC-Cpo-021904	Cavia porcellus	32.78	2.00e-35	140.00
IUUC-Csa-024029	Chlorocebus sabaeus	33.06	2.00e-36	144.00
IUUC-Cho-024728	Choloepus hoffmanni	41.98	2.00e-18	85.10
IUUC-Cin-025711	Ciona intestinalis	32.55	5.00e-34	135.00
IUUC-Csv-026354	Ciona savignyi	34.23	6.00e-35	139.00
IUUC-Dre-028409	Danio rerio	27.97	8.00e-28	115.00
IUUC-Dno-029902	Dasypus novemcinctus	32.64	1.00e-35	141.00
IUUC-Dor-030528	Dipodomys ordii	29.82	9.00e-24	102.00
IUUC-Dme-032006	Drosophila melanogaster	32.87	4.00e-35	139.00
IUUC-Ete-032808	Echinops telfairi	41.67	2.00e-19	88.60
IUUC-Eca-033585	Equus caballus	32.64	1.00e-35	141.00
IUUC-Eeu-035280	Erinaceus europaeus	41.67	1.00e-19	89.40
IUUC-Fca-035514	Felis catus	32.64	2.00e-35	140.00
IUUC-Fal-036909	Ficedula albicollis	31.40	3.00e-35	140.00
IUUC-Gmo-038871	Gadus morhua	40.24	3.00e-17	80.90
IUUC-Gga-040513	Gallus gallus	32.64	8.00e-36	142.00
IUUC-Gac-041417	Gasterosteus aculeatus	55.22	2.00e-20	90.90
IUUC-Gma-042798	Glycine max	30.49	3.00e-09	55.10
IUUC-Ggo-044870	Gorilla gorilla	33.06	2.00e-36	144.00
IUUC-Hsa-046308	Homo sapiens	33.06	2.00e-36	144.00
IUUC-Hvu-047653	Hordeum vulgare	29.27	4.00e-09	55.10
IUUC-Itr-048221	Ictidomys tridecemlineatus	32.37	2.00e-35	140.00
IUUC-Lch-050434	Latimeria chalumnae	31.25	2.00e-28	117.00
IUUC-Lpe-051490	Leersia perrieri	31.43	4.00e-09	54.70
IUUC-Loc-052499	Lepisosteus oculatus	30.56	3.00e-35	140.00
IUUC-Lma-052991	Leptosphaeria maculans	27.07	6.00e-08	52.40
IUUC-Laf-053480	Loxodonta africana	33.19	1.00e-35	141.00
IUUC-Mcc-054829	Macaca mulatta	33.06	2.00e-36	144.00
IUUC-Meu-056268	Macropus eugenii	35.79	4.00e-19	87.40
IUUC-Mtr-057854	Medicago truncatula	30.12	2.00e-07	48.50
IUUC-Mga-059573	Meleagris gallopavo	29.65	4.00e-23	100.00
IUUC-Mmr-061326	Microcebus murinus	33.47	5.00e-37	146.00
IUUC-Mdo-062485	Monodelphis domestica	32.51	2.00e-34	137.00
IUUC-Mmu-063919	Mus musculus	32.78	1.00e-35	141.00
IUUC-Mac-065443	Musa acuminata	32.53	6.00e-09	53.90
IUUC-Mpu-066589	Mustela putorius furo	32.64	4.00e-35	140.00
IUUC-Mlu-067880	Myotis lucifugus	28.21	3.00e-24	103.00
IUUC-Nle-069442	Nomascus leucogenys	33.06	2.00e-36	144.00
IUUC-Opr-070753	Ochotona princeps	53.73	1.00e-19	88.60
IUUC-Ont-072514	Oreochromis niloticus	31.73	7.00e-36	142.00
IUUC-Oan-073034	Ornithorhynchus anatinus	32.57	2.00e-34	137.00
IUUC-Ocu-074720	Oryctolagus cuniculus	33.61	5.00e-36	142.00
IUUC-Oba-075928	Oryza barthii	32.39	4.00e-09	54.70
IUUC-Obr-076192	Oryza brachyantha	28.57	2.00e-08	52.40
IUUC-Ogl-077158	Oryza glaberrima	32.39	4.00e-09	54.70
IUUC-Ogu-078857	Oryza glumaepatula	32.39	4.00e-09	54.70
IUUC-Oin-080071	Oryza indica	32.47	1.00e-09	56.20
IUUC-Olo-080821	Oryza longistaminata	32.39	4.00e-09	54.70
IUUC-Ome-081413	Oryza meridionalis	32.47	2.00e-09	55.50
IUUC-Oni-082240	Oryza nivara	32.47	1.00e-09	56.20
IUUC-Opu-083660	Oryza punctata	32.39	3.00e-09	54.70
IUUC-Oru-084344	Oryza rufipogon	32.39	4.00e-09	54.70
IUUC-Osa-086282	Oryza sativa	27.71	3.00e-08	51.60
IUUC-Ola-087347	Oryzias latipes	32.53	6.00e-37	145.00
IUUC-Oga-088901	Otolemur garnettii	33.47	5.00e-37	146.00
IUUC-Oar-089963	Ovis aries	30.36	2.00e-24	104.00
IUUC-Ptr-090761	Pan troglodytes	33.20	6.00e-37	145.00
IUUC-Pan-092617	Papio anubis	33.06	2.00e-36	144.00
IUUC-Psi-093117	Pelodiscus sinensis	33.47	6.00e-36	142.00
IUUC-Pma-094526	Petromyzon marinus	48.42	1.00e-26	110.00
IUUC-Ppa-095811	Physcomitrella patens	33.87	2.00e-06	46.20
IUUC-Pfo-096724	Poecilia formosa	32.53	1.00e-35	142.00
IUUC-Pab-097921	Pongo abelii	32.78	2.00e-36	144.00
IUUC-Pop-098807	Populus trichocarpa	28.41	3.00e-09	55.10
IUUC-Pca-100156	Procavia capensis	32.61	3.00e-34	136.00
IUUC-Ppe-102026	Prunus persica	28.92	3.00e-08	51.20
IUUC-Pva-102841	Pteropus vampyrus	33.68	4.00e-28	116.00
IUUC-Ptt-103843	Puccinia triticina	38.46	4.00e-06	44.30
IUUC-Rno-105088	Rattus norvegicus	32.78	1.00e-35	141.00
IUUC-Sha-107034	Sarcophilus harrisii	31.20	2.00e-35	141.00
IUUC-Smo-109158	Selaginella moellendorffii	33.85	2.00e-07	49.30
IUUC-Sit-110796	Setaria italica	30.99	1.00e-08	53.10
IUUC-Sly-111519	Solanum lycopersicum	33.33	1.00e-07	49.70
IUUC-Stu-112366	Solanum tuberosum	33.33	1.00e-07	49.30
IUUC-Sar-113067	Sorex araneus	50.65	3.00e-23	100.00
IUUC-Sbi-114041	Sorghum bicolor	29.89	7.00e-10	55.50
IUUC-Ssc-115483	Sus scrofa	33.68	1.00e-28	117.00
IUUC-Tgu-116929	Taeniopygia guttata	31.40	2.00e-35	140.00
IUUC-Tru-117696	Takifugu rubripes	30.77	3.00e-22	97.40
IUUC-Tsy-119590	Tarsius syrichta	36.84	3.00e-19	87.80
IUUC-Tni-120530	Tetraodon nigroviridis	26.44	9.00e-21	92.40
IUUC-Tca-121638	Theobroma cacao	31.33	7.00e-09	53.90
IUUC-Tae-123639	Triticum aestivum	31.58	8.00e-10	57.00
IUUC-Tur-126396	Triticum urartu	29.87	4.00e-09	54.70
IUUC-Tbe-127854	Tupaia belangeri	31.20	2.00e-31	127.00
IUUC-Ttr-128958	Tursiops truncatus	31.40	5.00e-32	129.00
IUUC-Vpa-130189	Vicugna pacos	28.21	2.00e-24	104.00
IUUC-Vvi-131533	Vitis vinifera	30.12	2.00e-08	52.40
IUUC-Xtr-131955	Xenopus tropicalis	34.76	8.00e-35	139.00
IUUC-Xma-133504	Xiphophorus maculatus	32.53	1.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence