iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107971

Ensembl Protein ID

EEB09776

UniProt Accession

B6K8C2; B6K8C2_SCHJY

Genbank Protein ID

EEB09776.1

Protein Name

RACK1 Cpc2

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_05000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_05000	EEB09776	EEB09776

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-46	152.5	146	181
UBD/Beta-Prp	2.10e-78	261.5	10	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrt 32
           gH+d+v+c++f   +d  ++vs+++D+++kvWDl +
   Q: 146  GHSDWVSCVRFspnPDnVTFVSAGWDKVVKVWDLES 181
           8***********9988888**************976 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           tl+gh   v +  +  ++ ++l++gsrd+ti++w++t+ ++      r+l gh+ +v+++++s d+ + +++s D+ti++wdl+ g c+h + gh+++vls
   Q: 10   TLEGHSGWVTSLSTAPENPDILLSGSRDKTIILWNLTRDDVnygvaQRRLTGHNHFVSDCSLSYDSRYALSASWDKTIRLWDLEEGVCTHQFVGHTSDVLS 110
           56666666666666688899*******************99****9******************************************************* PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           +sfsp++  +vsGs+d+ti++w++  + ++  t+ gh+++v+cv+++p+     +vs++ D++v++Wdl++  l +t  g ht++++ ++++++g  ++sg
   Q: 111  VSFSPDNRQVVSGSRDKTIKIWNIIGNCKYTITEGGHSDWVSCVRFSPNPdnVTFVSAGWDKVVKVWDLESFALRTTHHG-HTGYINAVTISPDGSLCASG 210
           ************************99999988*************987644389***************88777777777.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           ++dg + lwdl +++ +++l++  +n++ v fs  + + ++++   siri+dl+s++ +  l
   Q: 211  GKDGVLMLWDLNENKHLYSLEAK-TNINAVVFS-PNRYWLCAATGSSIRIFDLESQEKVDEL 270
           ********************985.689999999.77888888999**********9987655 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MPEQLVLRAT LEGHSGWVTS LSTAPENPDI LLSGSRDKTI ILWNLTRDDV NYGVAQRRLT 60
GHNHFVSDCS LSYDSRYALS ASWDKTIRLW DLEEGVCTHQ FVGHTSDVLS VSFSPDNRQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAAAAACAG TCACATACTA TATACATACA ATTTAAACCA AAATCTCCTT TCTCCAAGAC 60
ATCACGACCA GTCAACATGC CAGAACAACT TGTGCTCCGT GCAACGCTCG AAGGTCATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0022627--C:cytosolic small ribosomal subunit
GO:0005092--F:GDP-dissociation inhibitor activity
GO:0043022--F:ribosome binding
GO:0004871--F:signal transducer activity
GO:0000747--P:conjugation with cellular fusion
GO:0007186--P:G-protein coupled receptor signaling pathway
GO:0010255--P:glucose mediated signaling pathway
GO:0001403--P:invasive growth in response to glucose limitation
GO:2001125--P:negative regulation of translational frameshifting
GO:0031954--P:positive regulation of protein autophosphorylation
GO:0060733--P:regulation of eIF2 alpha phosphorylation by amino acid starvation
GO:0032995--P:regulation of fungal-type cell wall biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000395	Aegilops tauschii	55.71	7.00e-86	308.00
IUUC-Aml-001935	Ailuropoda melanoleuca	65.81	5.00e-127	444.00
IUUC-Atr-002694	Amborella trichopoda	57.78	3.00e-106	375.00
IUUC-Apl-003918	Anas platyrhynchos	66.79	4.00e-112	395.00
IUUC-Aca-004869	Anolis carolinensis	65.81	5.00e-127	444.00
IUUC-Aly-005806	Arabidopsis lyrata	61.04	5.00e-114	401.00
IUUC-Ath-007584	Arabidopsis thaliana	60.74	2.00e-113	399.00
IUUC-Ago-007720	Ashbya gossypii	60.06	1.00e-110	390.00
IUUC-Acl-008156	Aspergillus clavatus	71.15	1.00e-133	466.00
IUUC-Afl-008684	Aspergillus flavus	71.47	4.00e-135	471.00
IUUC-Afu-008867	Aspergillus fumigatus	71.79	2.00e-135	472.00
IUUC-Ani-009221	Aspergillus nidulans	72.44	1.00e-136	477.00
IUUC-Ang-009843	Aspergillus niger	70.83	3.00e-134	468.00
IUUC-Aor-010193	Aspergillus oryzae	71.47	4.00e-135	471.00
IUUC-Ate-010420	Aspergillus terreus	71.02	2.00e-121	426.00
IUUC-Ame-010884	Astyanax mexicanus	66.77	2.00e-128	449.00
IUUC-Bgr-012064	Blumeria graminis	70.19	8.00e-134	467.00
IUUC-Bta-013357	Bos taurus	65.81	5.00e-127	444.00
IUUC-Bci-013862	Botrytis cinerea	72.12	4.00e-137	478.00
IUUC-Bdi-014690	Brachypodium distachyon	52.92	1.00e-94	337.00
IUUC-Bol-016005	Brassica oleracea	60.55	8.00e-114	401.00
IUUC-Bra-017817	Brassica rapa	60.74	1.00e-114	404.00
IUUC-Cel-018335	Caenorhabditis elegans	60.82	4.00e-104	369.00
IUUC-Cja-019914	Callithrix jacchus	65.81	5.00e-127	444.00
IUUC-Cfa-020755	Canis familiaris	65.81	5.00e-127	444.00
IUUC-Cpo-022377	Cavia porcellus	65.81	3.00e-127	445.00
IUUC-Cre-022909	Chlamydomonas reinhardtii	60.63	5.00e-110	388.00
IUUC-Csa-023025	Chlorocebus sabaeus	65.81	2.00e-126	443.00
IUUC-Cin-025647	Ciona intestinalis	61.22	2.00e-120	423.00
IUUC-Csv-026027	Ciona savignyi	61.22	3.00e-119	419.00
IUUC-Cgl-026718	Colletotrichum gloeosporioides	72.08	6.00e-124	434.00
IUUC-Cne-026930	Cryptococcus neoformans	64.74	3.00e-126	442.00
IUUC-Cme-027251	Cyanidioschyzon merolae	57.37	5.00e-107	378.00
IUUC-Dre-028669	Danio rerio	66.45	6.00e-128	447.00
IUUC-Dno-029470	Dasypus novemcinctus	56.83	4.00e-99	352.00
IUUC-Dor-031098	Dipodomys ordii	59.42	5.00e-98	348.00
IUUC-Dse-031255	Dothistroma septosporum	71.15	4.00e-135	471.00
IUUC-Dme-032118	Drosophila melanogaster	61.78	5.00e-118	415.00
IUUC-Ete-033182	Echinops telfairi	58.37	7.00e-73	265.00
IUUC-Eca-033296	Equus caballus	65.77	5.00e-57	210.00
IUUC-Eeu-034771	Erinaceus europaeus	62.94	1.00e-119	420.00
IUUC-Fca-036315	Felis catus	65.81	5.00e-127	444.00
IUUC-Fal-036990	Ficedula albicollis	65.34	2.00e-67	246.00
IUUC-Fox-037702	Fusarium oxysporum	71.79	2.00e-137	479.00
IUUC-Fso-038384	Fusarium solani	71.47	1.00e-136	476.00
IUUC-Gmo-039630	Gadus morhua	64.29	3.00e-123	432.00
IUUC-Ggr-039985	Gaeumannomyces graminis	73.08	4.00e-139	484.00
IUUC-Gga-040540	Gallus gallus	65.81	5.00e-127	444.00
IUUC-Gac-041316	Gasterosteus aculeatus	63.99	2.00e-124	436.00
IUUC-Gma-042872	Glycine max	58.02	5.00e-109	385.00
IUUC-Ggo-045253	Gorilla gorilla	65.81	5.00e-127	444.00
IUUC-Hsa-046809	Homo sapiens	65.81	5.00e-127	444.00
IUUC-Hvu-047683	Hordeum vulgare	53.68	9.00e-96	341.00
IUUC-Itr-048025	Ictidomys tridecemlineatus	65.81	5.00e-127	444.00
IUUC-Kpa-049214	Komagataella pastoris	59.68	3.00e-105	372.00
IUUC-Lch-049634	Latimeria chalumnae	64.86	9.00e-126	440.00
IUUC-Lpe-050762	Leersia perrieri	52.45	8.00e-94	334.00
IUUC-Loc-052163	Lepisosteus oculatus	65.50	2.00e-126	443.00
IUUC-Lma-053113	Leptosphaeria maculans	72.76	2.00e-137	479.00
IUUC-Laf-054422	Loxodonta africana	65.81	5.00e-127	444.00
IUUC-Mcc-055348	Macaca mulatta	65.81	1.00e-126	444.00
IUUC-Meu-056543	Macropus eugenii	65.81	4.00e-127	445.00
IUUC-Mor-057107	Magnaporthe oryzae	72.44	3.00e-138	482.00
IUUC-Mpo-057487	Magnaporthe poae	72.76	1.00e-138	483.00
IUUC-Mtr-058808	Medicago truncatula	58.02	4.00e-109	385.00
IUUC-Mla-058909	Melampsora laricipopulina	65.81	1.00e-126	443.00
IUUC-Mga-059387	Meleagris gallopavo	65.81	5.00e-127	444.00
IUUC-Mvi-060392	Microbotryum violaceum	66.99	3.00e-127	445.00
IUUC-Mmr-061141	Microcebus murinus	59.86	9.00e-93	330.00
IUUC-Mdo-062932	Monodelphis domestica	65.81	5.00e-127	444.00
IUUC-Mmu-064132	Mus musculus	65.81	5.00e-127	444.00
IUUC-Mac-064447	Musa acuminata	51.23	1.00e-89	320.00
IUUC-Mpu-066721	Mustela putorius furo	65.18	3.00e-124	435.00
IUUC-Mlu-068221	Myotis lucifugus	65.18	2.00e-118	416.00
IUUC-Nfi-068344	Neosartorya fischeri	71.47	7.00e-135	471.00
IUUC-Ncr-068722	Neurospora crassa	71.79	7.00e-138	481.00
IUUC-Nle-069865	Nomascus leucogenys	65.81	9.00e-127	444.00
IUUC-Opr-071100	Ochotona princeps	54.95	4.00e-97	345.00
IUUC-Ont-072287	Oreochromis niloticus	65.81	1.00e-127	446.00
IUUC-Oan-072788	Ornithorhynchus anatinus	65.81	5.00e-127	444.00
IUUC-Ocu-073844	Oryctolagus cuniculus	63.58	1.00e-120	424.00
IUUC-Oba-075981	Oryza barthii	49.69	3.00e-84	303.00
IUUC-Obr-076099	Oryza brachyantha	52.60	2.00e-94	337.00
IUUC-Ogl-077804	Oryza glaberrima	52.60	3.00e-95	339.00
IUUC-Ogu-078035	Oryza glumaepatula	53.23	2.00e-94	337.00
IUUC-Oin-079327	Oryza indica	53.23	2.00e-94	337.00
IUUC-Olo-081084	Oryza longistaminata	53.23	2.00e-94	337.00
IUUC-Ome-081366	Oryza meridionalis	52.60	2.00e-95	339.00
IUUC-Oni-082682	Oryza nivara	52.60	2.00e-95	339.00
IUUC-Opu-084010	Oryza punctata	52.60	4.00e-95	338.00
IUUC-Oru-084358	Oryza rufipogon	52.60	2.00e-95	339.00
IUUC-Osa-085296	Oryza sativa	52.60	2.00e-95	339.00
IUUC-Ola-086400	Oryzias latipes	66.13	4.00e-128	448.00
IUUC-Olu-087817	Ostreococcus lucimarinus	64.54	7.00e-118	414.00
IUUC-Oga-088811	Otolemur garnettii	65.81	5.00e-127	444.00
IUUC-Oar-089962	Ovis aries	65.81	5.00e-127	444.00
IUUC-Ptr-091340	Pan troglodytes	65.81	5.00e-127	444.00
IUUC-Pan-091946	Papio anubis	65.81	1.00e-126	444.00
IUUC-Pma-094535	Petromyzon marinus	66.45	4.00e-128	448.00
IUUC-Pno-095100	Phaeosphaeria nodorum	72.64	6.00e-92	327.00
IUUC-Ppa-095752	Physcomitrella patens	64.44	2.00e-118	416.00
IUUC-Pfo-097311	Poecilia formosa	65.81	6.00e-128	447.00
IUUC-Pab-097863	Pongo abelii	65.81	6.00e-127	444.00
IUUC-Pop-099345	Populus trichocarpa	59.88	1.00e-111	393.00
IUUC-Pca-100594	Procavia capensis	65.50	8.00e-126	441.00
IUUC-Ppe-101743	Prunus persica	57.06	2.00e-107	379.00
IUUC-Pva-102746	Pteropus vampyrus	54.63	3.00e-96	342.00
IUUC-Pgr-103375	Puccinia graminis	52.40	1.00e-88	317.00
IUUC-Ptt-103839	Puccinia triticina	66.77	7.00e-127	444.00
IUUC-Pte-104026	Pyrenophora teres	72.76	2.00e-137	479.00
IUUC-Pyt-104584	Pyrenophora triticirepentis	72.76	2.00e-137	479.00
IUUC-Rno-104964	Rattus norvegicus	65.81	5.00e-127	444.00
IUUC-Sce-106224	Saccharomyces cerevisiae	55.41	1.00e-99	353.00
IUUC-Sha-107409	Sarcophilus harrisii	65.81	5.00e-127	444.00
IUUC-Spo-108297	Schizosaccharomyces pombe	91.08	5.00e-174	600.00
IUUC-Ssl-108479	Sclerotinia sclerotiorum	72.12	4.00e-137	478.00
IUUC-Smo-109017	Selaginella moellendorffii	57.28	1.00e-103	367.00
IUUC-Sit-110680	Setaria italica	53.54	1.00e-95	341.00
IUUC-Sly-111218	Solanum lycopersicum	58.39	8.00e-110	387.00
IUUC-Stu-112775	Solanum tuberosum	58.20	1.00e-109	387.00
IUUC-Sar-113173	Sorex araneus	65.81	5.00e-127	444.00
IUUC-Sbi-114610	Sorghum bicolor	53.23	1.00e-95	340.00
IUUC-Sre-115107	Sporisorium reilianum	67.95	1.00e-132	463.00
IUUC-Ssc-116218	Sus scrofa	64.86	5.00e-123	431.00
IUUC-Tgu-117340	Taeniopygia guttata	30.72	1.00e-33	135.00
IUUC-Tru-118202	Takifugu rubripes	64.54	2.00e-125	439.00
IUUC-Tni-120260	Tetraodon nigroviridis	64.22	2.00e-124	436.00
IUUC-Tca-120951	Theobroma cacao	58.02	2.00e-109	387.00
IUUC-Tre-121961	Trichoderma reesei	71.79	7.00e-138	481.00
IUUC-Tvi-122447	Trichoderma virens	71.79	9.00e-138	480.00
IUUC-Tae-123560	Triticum aestivum	53.68	7.00e-96	341.00
IUUC-Tur-126335	Triticum urartu	58.05	3.00e-86	309.00
IUUC-Tme-127105	Tuber melanosporum	68.61	2.00e-125	439.00
IUUC-Tbe-128021	Tupaia belangeri	54.04	9.00e-56	207.00
IUUC-Ttr-128637	Tursiops truncatus	57.51	7.00e-106	374.00
IUUC-Uma-129634	Ustilago maydis	68.27	5.00e-133	464.00
IUUC-Vda-129923	Verticillium dahliae	71.15	3.00e-136	475.00
IUUC-Vpa-130410	Vicugna pacos	52.51	3.00e-75	272.00
IUUC-Vvi-131115	Vitis vinifera	57.98	2.00e-109	386.00
IUUC-Xtr-132105	Xenopus tropicalis	65.81	7.00e-127	444.00
IUUC-Xma-133875	Xiphophorus maculatus	65.81	3.00e-127	445.00
IUUC-Yli-134624	Yarrowia lipolytica	62.58	9.00e-120	421.00
IUUC-Zma-134711	Zea mays	54.15	2.00e-96	343.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence