iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017732

Ensembl Protein ID

Bra012820.1-P

UniProt Accession

M4D8L0; M4D8L0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012820	Bra012820.1	Bra012820.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.80e-11	44.4	266	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek..slveCekCrewfHpaClkls....veeelpnsekwiCpkCrs 53
           ++C+vC + ++d++   +v+C+ C++w+H +C ++s    ++ ++ ++ ++ C+ Cr 
   Q: 266  NYCPVCLKVYRDSEatPMVCCDFCQRWVHCTCDGISderyMQFQVDGHLQYKCSTCRG 323
           79**********99878888888*************88776677777777******85 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MVFHVACPIT CRKICDCLLG FPRNLHVKEV KDVFLNDIHS LQNFLPDPWD AGGVFKDGTV 60
QIHVPRDVVA VGEDSEVKVE ASTQGKRNVV LLKKKKVAED STANPDSDNL MVPVTEINGE 120

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Nucleotide Sequence
(Fasta)

ATGGTCTTTC ATGTAGCTTG TCCAATCACT TGGTAATGTT TTGTCTCCTC TCTTCTTTCG 60
CTTTTTGGCG CCTCTTCGTT GTTTTACTAA TTACGAATTG TTCCTTTGTC GTTTCTCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015659	Brassica oleracea	87.03	0.00e+00	1085.00
IUUC-Cel-018354	Caenorhabditis elegans	29.65	2.00e-19	92.80
IUUC-Cin-025528	Ciona intestinalis	36.17	7.00e-12	64.70
IUUC-Csv-026268	Ciona savignyi	30.09	1.00e-21	99.40
IUUC-Pma-094252	Petromyzon marinus	33.85	1.00e-21	99.80
IUUC-Pgr-103522	Puccinia graminis	34.02	5.00e-10	60.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence