iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099620

Ensembl Protein ID

POPTR_0009s06460.1

UniProt Accession

B9HNQ8; B9HNQ8_POPTR

Genbank Protein ID

EEE87996.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_722815; POPTR_0009s06460g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s06460	POPTR_0009s06460.1	POPTR_0009s06460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.80e-16	59.5	280	337

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek..slveCekCrewfHpaClkls....veeelpnsekwiCpkCrs 53
           ++C+vC + ++d++   +v+C++C++w+H +C ++s     + ++ ++ ++ C  Cr 
   Q: 280  NYCPVCLKVYRDSEstPMVCCDICQRWVHCHCDGISdekyLQFQVDGNLQYQCATCRG 337
           79*********9988899******************76655555666666******85 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAFHVACPIT CRRICFCSLG FPRDLHSTKP KADFLFDVAR IDEFLKDPLG IRASREGTVL 60
VSVPKVVPVP APIPPTHSLE VVSARDREGD GGVGEEAFST QTKRVAIQRQ AAAAKASAEY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTAATTAAT AAATAAATAA AGGAACCACC TCTAAATCCT CTCTCCAAAA AATAATCAAA 60
ACTCCTCAAT ATGGCCTTTC ACGTAGCTTG CCCAATTACA TGGTCAGTAG TGGTATTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS51292--ZF_RING_CH

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0009s06460g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003006	Amborella trichopoda	42.68	1.00e-169	589.00
IUUC-Aly-006363	Arabidopsis lyrata	51.40	0.00e+00	773.00
IUUC-Ath-007307	Arabidopsis thaliana	51.45	0.00e+00	769.00
IUUC-Ame-010705	Astyanax mexicanus	31.31	1.00e-23	107.00
IUUC-Bta-013578	Bos taurus	32.84	3.00e-26	115.00
IUUC-Bdi-014882	Brachypodium distachyon	43.40	5.00e-143	501.00
IUUC-Bol-015791	Brassica oleracea	49.77	0.00e+00	745.00
IUUC-Bra-017422	Brassica rapa	50.12	0.00e+00	743.00
IUUC-Cel-018354	Caenorhabditis elegans	27.62	1.00e-15	79.70
IUUC-Cfa-020020	Canis familiaris	31.84	1.00e-25	113.00
IUUC-Csv-026268	Ciona savignyi	30.50	9.00e-22	99.40
IUUC-Cme-027255	Cyanidioschyzon merolae	38.60	4.00e-05	42.00
IUUC-Dor-030903	Dipodomys ordii	31.65	8.00e-26	114.00
IUUC-Gma-043720	Glycine max	54.12	0.00e+00	788.00
IUUC-Ggo-044791	Gorilla gorilla	31.65	6.00e-26	114.00
IUUC-Hvu-047762	Hordeum vulgare	51.01	1.00e-110	392.00
IUUC-Lpe-051476	Leersia perrieri	65.85	7.00e-114	404.00
IUUC-Loc-052891	Lepisosteus oculatus	31.53	6.00e-26	115.00
IUUC-Mvi-060531	Microbotryum violaceum	33.96	6.00e-12	66.60
IUUC-Oba-075328	Oryza barthii	40.06	3.00e-117	415.00
IUUC-Obr-076458	Oryza brachyantha	43.05	9.00e-138	483.00
IUUC-Ogl-077851	Oryza glaberrima	42.94	2.00e-147	515.00
IUUC-Ogu-078706	Oryza glumaepatula	42.60	2.00e-140	492.00
IUUC-Oin-079802	Oryza indica	61.41	2.00e-111	395.00
IUUC-Olo-080932	Oryza longistaminata	43.18	2.00e-140	492.00
IUUC-Ome-081954	Oryza meridionalis	35.10	2.00e-90	326.00
IUUC-Oni-082043	Oryza nivara	43.18	3.00e-140	492.00
IUUC-Opu-083679	Oryza punctata	70.41	1.00e-116	413.00
IUUC-Oru-084257	Oryza rufipogon	43.18	4.00e-140	491.00
IUUC-Osa-085421	Oryza sativa	43.08	9.00e-141	493.00
IUUC-Olu-087718	Ostreococcus lucimarinus	35.11	9.00e-10	59.70
IUUC-Oar-089447	Ovis aries	32.84	3.00e-26	115.00
IUUC-Ppe-101920	Prunus persica	57.83	0.00e+00	841.00
IUUC-Pgr-103522	Puccinia graminis	31.00	5.00e-09	56.60
IUUC-Sit-110552	Setaria italica	44.74	2.00e-153	535.00
IUUC-Sly-111109	Solanum lycopersicum	52.16	0.00e+00	735.00
IUUC-Sre-115066	Sporisorium reilianum	31.97	6.00e-13	69.70
IUUC-Tae-124647	Triticum aestivum	49.36	3.00e-107	381.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence