iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132529

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

IK cytokine, down-regulator of HLA II

Genbank Nucleotide ID

AAMC01100033

Gene Name

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000016509.3	ENSXETT00000036010.3	ENSXETP00000036010.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-23	81.0	605	637

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtg 33
           H ++ +cl + +++l+++G d+g +kvWDlr++
   Q: 605  HDSPLNCLLLiDENLFATGDDNGMLKVWDLRRD 637
           99*****987877*****************987 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MPREYNEDED PAARRRKKKS YYAKLRQQEI EREKELAEKY RDRAKERRDG VNKDYEETEL 60
ISTTANYRAV GPTAEADKSA AEKRRQLIQE SKFLGGDMEH THLVKGLDFA LLQKVRAEIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCACGTG AATATAATGA GGATGAAGAT CCAGCAGCTC GAAGAAGAAA GAAAAAAAGG 60
TATAACTAAT TGTCCATTTG CAGTTGGTTC TAAGTGTATA CTTCTCTTAG AACAACATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012492--RED_C
IPR012916--RED_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07807--RED_C
PF07808--RED_N
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	33.02	6.00e-50	191.00
IUUC-Aml-001768	Ailuropoda melanoleuca	73.52	0.00e+00	1108.00
IUUC-Atr-002764	Amborella trichopoda	39.87	5.00e-24	103.00
IUUC-Apl-003880	Anas platyrhynchos	66.26	0.00e+00	1002.00
IUUC-Aca-005060	Anolis carolinensis	77.05	0.00e+00	1165.00
IUUC-Aly-006484	Arabidopsis lyrata	34.04	1.00e-44	172.00
IUUC-Ath-006652	Arabidopsis thaliana	38.30	4.00e-56	211.00
IUUC-Acl-008007	Aspergillus clavatus	23.14	2.00e-09	56.60
IUUC-Bta-013497	Bos taurus	66.95	8.00e-144	503.00
IUUC-Bdi-014378	Brachypodium distachyon	37.54	1.00e-56	213.00
IUUC-Bol-016352	Brassica oleracea	38.65	1.00e-57	216.00
IUUC-Bra-017103	Brassica rapa	39.01	1.00e-58	219.00
IUUC-Cel-018192	Caenorhabditis elegans	24.39	1.00e-14	73.60
IUUC-Cja-018792	Callithrix jacchus	66.94	3.00e-147	514.00
IUUC-Cfa-020739	Canis familiaris	74.67	0.00e+00	1090.00
IUUC-Cpo-022331	Cavia porcellus	67.60	9.00e-148	516.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	38.30	4.00e-37	147.00
IUUC-Csa-023414	Chlorocebus sabaeus	65.77	1.00e-149	522.00
IUUC-Cho-024600	Choloepus hoffmanni	67.38	2.00e-134	471.00
IUUC-Cin-025565	Ciona intestinalis	39.30	2.00e-71	262.00
IUUC-Csv-026294	Ciona savignyi	37.69	5.00e-67	247.00
IUUC-Cne-026979	Cryptococcus neoformans	31.03	2.00e-40	159.00
IUUC-Cme-027192	Cyanidioschyzon merolae	26.70	3.00e-20	92.80
IUUC-Dre-028492	Danio rerio	70.55	5.00e-140	490.00
IUUC-Dno-030050	Dasypus novemcinctus	86.90	2.00e-176	612.00
IUUC-Dor-030386	Dipodomys ordii	58.45	3.00e-119	421.00
IUUC-Dse-031203	Dothistroma septosporum	25.76	3.00e-14	73.20
IUUC-Dme-032012	Drosophila melanogaster	38.53	2.00e-64	239.00
IUUC-Ete-032491	Echinops telfairi	64.69	1.00e-146	511.00
IUUC-Eca-033583	Equus caballus	74.91	0.00e+00	1102.00
IUUC-Eeu-034976	Erinaceus europaeus	69.41	3.00e-129	454.00
IUUC-Fca-036417	Felis catus	66.48	1.00e-145	509.00
IUUC-Gmo-039505	Gadus morhua	69.50	7.00e-151	526.00
IUUC-Gga-040732	Gallus gallus	70.71	3.00e-149	520.00
IUUC-Gac-041313	Gasterosteus aculeatus	65.88	6.00e-141	493.00
IUUC-Gma-044122	Glycine max	40.35	2.00e-60	226.00
IUUC-Ggo-044748	Gorilla gorilla	67.78	1.00e-147	516.00
IUUC-Hsa-046943	Homo sapiens	67.50	3.00e-147	514.00
IUUC-Hvu-047659	Hordeum vulgare	36.27	5.00e-54	204.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	69.53	5.00e-147	513.00
IUUC-Lch-050331	Latimeria chalumnae	67.31	1.00e-136	479.00
IUUC-Lpe-051193	Leersia perrieri	39.44	3.00e-62	231.00
IUUC-Loc-051946	Lepisosteus oculatus	72.31	0.00e+00	948.00
IUUC-Lma-052960	Leptosphaeria maculans	23.26	4.00e-10	58.90
IUUC-Laf-054035	Loxodonta africana	67.33	4.00e-145	507.00
IUUC-Mcc-055285	Macaca mulatta	69.89	1.00e-74	271.00
IUUC-Meu-056596	Macropus eugenii	69.19	6.00e-146	509.00
IUUC-Mor-056995	Magnaporthe oryzae	23.74	2.00e-11	63.50
IUUC-Mtr-058637	Medicago truncatula	40.62	4.00e-60	225.00
IUUC-Mga-059839	Meleagris gallopavo	68.61	0.00e+00	949.00
IUUC-Mdo-062868	Monodelphis domestica	72.31	0.00e+00	1091.00
IUUC-Mmu-064305	Mus musculus	68.70	4.00e-147	514.00
IUUC-Mac-065041	Musa acuminata	39.36	8.00e-60	223.00
IUUC-Mpu-066779	Mustela putorius furo	65.55	6.00e-143	500.00
IUUC-Mlu-067223	Myotis lucifugus	74.07	0.00e+00	1085.00
IUUC-Nle-069852	Nomascus leucogenys	67.50	1.00e-146	512.00
IUUC-Ont-072452	Oreochromis niloticus	68.05	2.00e-146	511.00
IUUC-Oan-073163	Ornithorhynchus anatinus	73.97	5.00e-57	213.00
IUUC-Ocu-074628	Oryctolagus cuniculus	69.23	6.00e-145	506.00
IUUC-Oba-075868	Oryza barthii	38.03	2.00e-57	215.00
IUUC-Obr-076768	Oryza brachyantha	38.73	3.00e-59	221.00
IUUC-Ogl-077424	Oryza glaberrima	38.73	4.00e-60	224.00
IUUC-Ogu-078847	Oryza glumaepatula	38.38	6.00e-58	217.00
IUUC-Oin-079495	Oryza indica	38.73	4.00e-60	224.00
IUUC-Olo-080268	Oryza longistaminata	38.38	7.00e-58	217.00
IUUC-Ome-081709	Oryza meridionalis	37.98	2.00e-50	192.00
IUUC-Oni-082749	Oryza nivara	38.73	4.00e-60	224.00
IUUC-Opu-084023	Oryza punctata	31.69	4.00e-40	158.00
IUUC-Oru-084764	Oryza rufipogon	38.38	6.00e-58	217.00
IUUC-Osa-086009	Oryza sativa	38.73	5.00e-60	224.00
IUUC-Ola-086463	Oryzias latipes	63.66	1.00e-136	479.00
IUUC-Olu-087897	Ostreococcus lucimarinus	34.27	2.00e-47	182.00
IUUC-Oga-089114	Otolemur garnettii	66.95	5.00e-146	510.00
IUUC-Ptr-090556	Pan troglodytes	67.50	2.00e-147	514.00
IUUC-Pan-092828	Papio anubis	67.78	5.00e-149	520.00
IUUC-Psi-093609	Pelodiscus sinensis	70.28	0.00e+00	989.00
IUUC-Pma-094413	Petromyzon marinus	53.99	1.00e-106	379.00
IUUC-Pno-094833	Phaeosphaeria nodorum	23.26	6.00e-06	45.10
IUUC-Ppa-095422	Physcomitrella patens	35.92	1.00e-58	220.00
IUUC-Pfo-096389	Poecilia formosa	67.16	3.00e-144	504.00
IUUC-Pab-098095	Pongo abelii	68.06	7.00e-148	516.00
IUUC-Pop-099612	Populus trichocarpa	39.51	1.00e-57	216.00
IUUC-Pca-100408	Procavia capensis	66.29	2.00e-142	498.00
IUUC-Ppe-101931	Prunus persica	39.65	8.00e-56	210.00
IUUC-Pva-102549	Pteropus vampyrus	70.41	2.00e-147	515.00
IUUC-Pte-104351	Pyrenophora teres	22.92	2.00e-09	58.50
IUUC-Rno-105079	Rattus norvegicus	75.44	0.00e+00	1133.00
IUUC-Sha-107299	Sarcophilus harrisii	75.38	0.00e+00	1073.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	28.76	3.00e-23	102.00
IUUC-Spo-108122	Schizosaccharomyces pombe	29.11	5.00e-27	114.00
IUUC-Smo-109673	Selaginella moellendorffii	37.84	6.00e-55	207.00
IUUC-Sit-110263	Setaria italica	37.07	1.00e-57	216.00
IUUC-Sly-110988	Solanum lycopersicum	37.19	3.00e-53	202.00
IUUC-Stu-112713	Solanum tuberosum	37.54	5.00e-54	204.00
IUUC-Sbi-114617	Sorghum bicolor	37.59	1.00e-55	209.00
IUUC-Sre-115136	Sporisorium reilianum	29.41	5.00e-14	72.40
IUUC-Ssc-116268	Sus scrofa	73.96	0.00e+00	1108.00
IUUC-Tgu-116720	Taeniopygia guttata	73.25	0.00e+00	925.00
IUUC-Tru-117977	Takifugu rubripes	65.88	3.00e-133	468.00
IUUC-Tsy-119121	Tarsius syrichta	68.33	8.00e-88	317.00
IUUC-Tni-119904	Tetraodon nigroviridis	64.58	1.00e-135	476.00
IUUC-Tca-121718	Theobroma cacao	38.21	9.00e-59	220.00
IUUC-Tae-124219	Triticum aestivum	36.97	6.00e-56	211.00
IUUC-Tme-126922	Tuber melanosporum	22.19	8.00e-14	72.00
IUUC-Tbe-127276	Tupaia belangeri	69.13	2.00e-119	421.00
IUUC-Uma-129505	Ustilago maydis	32.52	5.00e-15	75.50
IUUC-Vpa-130276	Vicugna pacos	68.75	8.00e-99	352.00
IUUC-Vvi-131377	Vitis vinifera	38.60	1.00e-59	224.00
IUUC-Xma-134177	Xiphophorus maculatus	66.57	6.00e-136	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence