iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069307

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01131785

Gene Name

TSSC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000007514.2	ENSNLET00000009577.2	ENSNLEP00000009138.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-12	45.6	253	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H    ++l+f ++   +l+s++dD+++k WD+r
   Q: 253  HGQLLRDLDFnPNkqYYLASCGDDCKVKFWDTR 285
           7778899****555799**************86 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQIHIIDFDD ENNIINKNVL 60
LHQAGEIWHI SASPADRGVL ATCYNRSSCC LLSLETHVCF FCSCSLSIML CCSASDSKVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCAATGGA CCAATGCGCG CTGCGACTGT GTTACTCAAC TTTGCAGCGT CTCATCTGTA 60
AAATGGAAGT GTAACGGCTT ATTCATGGGG TTGGATGAAG CTCCTTATGG CAGTGCGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	30.13	4.00e-32	132.00
IUUC-Aml-002348	Ailuropoda melanoleuca	91.74	5.00e-116	409.00
IUUC-Atr-003028	Amborella trichopoda	30.13	1.00e-41	163.00
IUUC-Apl-004211	Anas platyrhynchos	83.17	2.00e-173	601.00
IUUC-Aca-004893	Anolis carolinensis	82.61	1.00e-178	619.00
IUUC-Aly-005975	Arabidopsis lyrata	29.75	3.00e-42	165.00
IUUC-Ath-006902	Arabidopsis thaliana	30.35	1.00e-44	173.00
IUUC-Ame-010619	Astyanax mexicanus	78.02	2.00e-173	601.00
IUUC-Bta-013035	Bos taurus	80.19	0.00e+00	629.00
IUUC-Bdi-014619	Brachypodium distachyon	30.27	2.00e-44	172.00
IUUC-Bol-016581	Brassica oleracea	29.25	1.00e-42	166.00
IUUC-Bra-017885	Brassica rapa	30.33	2.00e-44	172.00
IUUC-Cel-018344	Caenorhabditis elegans	43.43	1.00e-41	163.00
IUUC-Cja-018975	Callithrix jacchus	90.89	0.00e+00	684.00
IUUC-Cfa-020214	Canis familiaris	85.27	0.00e+00	626.00
IUUC-Cpo-021363	Cavia porcellus	83.57	5.00e-171	593.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	24.69	7.00e-27	114.00
IUUC-Csa-023240	Chlorocebus sabaeus	89.86	0.00e+00	629.00
IUUC-Cho-024713	Choloepus hoffmanni	86.47	8.00e-175	606.00
IUUC-Cin-025678	Ciona intestinalis	42.69	9.00e-95	340.00
IUUC-Csv-026022	Ciona savignyi	43.43	1.00e-92	333.00
IUUC-Dre-027817	Danio rerio	76.33	0.00e+00	627.00
IUUC-Dno-030097	Dasypus novemcinctus	86.96	1.00e-177	615.00
IUUC-Dme-031866	Drosophila melanogaster	35.82	4.00e-69	254.00
IUUC-Ete-032575	Echinops telfairi	72.47	1.00e-117	415.00
IUUC-Eca-034323	Equus caballus	83.00	4.00e-133	466.00
IUUC-Eeu-035217	Erinaceus europaeus	66.67	5.00e-128	450.00
IUUC-Fca-035709	Felis catus	82.63	2.00e-156	544.00
IUUC-Fal-036989	Ficedula albicollis	83.09	5.00e-175	606.00
IUUC-Gmo-038623	Gadus morhua	64.98	4.00e-142	497.00
IUUC-Gga-040157	Gallus gallus	83.09	2.00e-179	621.00
IUUC-Gac-041368	Gasterosteus aculeatus	54.55	4.00e-99	354.00
IUUC-Gma-044196	Glycine max	29.18	2.00e-41	162.00
IUUC-Ggo-044513	Gorilla gorilla	92.51	0.00e+00	657.00
IUUC-Hsa-046844	Homo sapiens	91.06	0.00e+00	651.00
IUUC-Hvu-047435	Hordeum vulgare	31.76	4.00e-46	178.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	89.90	4.00e-136	476.00
IUUC-Lch-049696	Latimeria chalumnae	80.19	2.00e-175	608.00
IUUC-Lpe-050988	Leersia perrieri	29.81	2.00e-32	132.00
IUUC-Loc-052440	Lepisosteus oculatus	79.76	1.00e-172	598.00
IUUC-Laf-054088	Loxodonta africana	86.23	4.00e-175	607.00
IUUC-Mcc-055575	Macaca mulatta	89.61	6.00e-179	619.00
IUUC-Meu-056807	Macropus eugenii	71.01	1.00e-139	489.00
IUUC-Mtr-058599	Medicago truncatula	29.44	1.00e-41	163.00
IUUC-Mga-059336	Meleagris gallopavo	80.68	3.00e-166	577.00
IUUC-Mmr-061706	Microcebus murinus	86.71	0.00e+00	647.00
IUUC-Mdo-062736	Monodelphis domestica	84.30	5.00e-172	596.00
IUUC-Mmu-064265	Mus musculus	83.82	0.00e+00	654.00
IUUC-Mac-065342	Musa acuminata	29.32	1.00e-41	163.00
IUUC-Mpu-066514	Mustela putorius furo	83.57	0.00e+00	650.00
IUUC-Mlu-067072	Myotis lucifugus	91.37	5.00e-104	369.00
IUUC-Opr-070283	Ochotona princeps	65.46	5.00e-128	450.00
IUUC-Ont-072532	Oreochromis niloticus	74.15	1.00e-165	575.00
IUUC-Oan-073222	Ornithorhynchus anatinus	81.18	1.00e-172	598.00
IUUC-Oba-075849	Oryza barthii	30.67	6.00e-34	138.00
IUUC-Obr-076488	Oryza brachyantha	28.95	5.00e-37	148.00
IUUC-Ogl-077928	Oryza glaberrima	31.06	3.00e-36	145.00
IUUC-Ogu-077997	Oryza glumaepatula	30.67	7.00e-34	137.00
IUUC-Oin-079848	Oryza indica	31.06	5.00e-36	144.00
IUUC-Oni-082492	Oryza nivara	30.67	6.00e-34	138.00
IUUC-Oru-085119	Oryza rufipogon	30.67	7.00e-34	137.00
IUUC-Osa-086152	Oryza sativa	31.06	2.00e-36	146.00
IUUC-Ola-086694	Oryzias latipes	73.27	2.00e-170	592.00
IUUC-Olu-087749	Ostreococcus lucimarinus	31.86	1.00e-21	96.30
IUUC-Oga-088180	Otolemur garnettii	92.51	9.00e-143	499.00
IUUC-Oar-089621	Ovis aries	68.33	2.00e-127	448.00
IUUC-Ptr-091053	Pan troglodytes	85.27	4.00e-175	607.00
IUUC-Pan-091918	Papio anubis	89.37	2.00e-180	624.00
IUUC-Psi-093545	Pelodiscus sinensis	82.85	2.00e-172	598.00
IUUC-Pma-094439	Petromyzon marinus	68.10	9.00e-156	542.00
IUUC-Pfo-096127	Poecilia formosa	75.36	2.00e-169	588.00
IUUC-Pab-097916	Pongo abelii	87.92	0.00e+00	638.00
IUUC-Pop-098864	Populus trichocarpa	28.40	4.00e-40	158.00
IUUC-Pca-100797	Procavia capensis	75.12	5.00e-158	550.00
IUUC-Ppe-101796	Prunus persica	29.18	5.00e-44	171.00
IUUC-Pva-103228	Pteropus vampyrus	80.43	4.00e-173	600.00
IUUC-Rno-104877	Rattus norvegicus	83.82	6.00e-179	619.00
IUUC-Sha-106940	Sarcophilus harrisii	84.34	1.00e-180	625.00
IUUC-Smo-109355	Selaginella moellendorffii	30.50	5.00e-50	191.00
IUUC-Sit-109958	Setaria italica	31.50	4.00e-46	178.00
IUUC-Sly-111871	Solanum lycopersicum	29.35	6.00e-41	160.00
IUUC-Stu-112128	Solanum tuberosum	28.97	6.00e-39	154.00
IUUC-Sar-113084	Sorex araneus	68.82	7.00e-103	366.00
IUUC-Sbi-114122	Sorghum bicolor	31.44	8.00e-45	174.00
IUUC-Ssc-115385	Sus scrofa	78.99	7.00e-169	586.00
IUUC-Tgu-117090	Taeniopygia guttata	80.75	6.00e-167	580.00
IUUC-Tru-118548	Takifugu rubripes	71.46	4.00e-170	590.00
IUUC-Tsy-119435	Tarsius syrichta	88.16	1.00e-173	602.00
IUUC-Tni-120311	Tetraodon nigroviridis	63.70	2.00e-133	468.00
IUUC-Tca-121141	Theobroma cacao	28.61	8.00e-39	154.00
IUUC-Tae-122717	Triticum aestivum	31.76	5.00e-46	177.00
IUUC-Tbe-127623	Tupaia belangeri	69.42	1.00e-73	269.00
IUUC-Ttr-128706	Tursiops truncatus	68.84	3.00e-141	494.00
IUUC-Vvi-130871	Vitis vinifera	30.47	5.00e-38	151.00
IUUC-Xtr-131950	Xenopus tropicalis	79.23	2.00e-174	604.00
IUUC-Xma-133364	Xiphophorus maculatus	74.88	1.00e-167	582.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence