iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098990

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_816462; POPTR_0002s12380g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s12380	POPTR_0002s12380.1	POPTR_0002s12380.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	57.79	2.00e-47	185.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKRPLDTDPG NQNKIDIKMK KKRYQEDENK EEIESAVNTG SGFMNLDENL LFEVLKHVDA 60
RTLGSAACVS KQWHRTVQDE RLWELVCTKH WGNMGCGNQQ MRSVVLALGG FRRLHSQYLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCCTCCCTC TCTCTATCCC CCCTCCCTCC CTTTCTCCAT GAAGCGCCCA CTCGACACCG 60
ATCCCGGAAA CCAAAACAAA ATTGACATAA AAATGAAGAA GAAGAGGTAC CAAGAAGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

KEGG

pop:POPTR_0002s12380g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	64.93	2.00e-40	157.00
IUUC-Aly-006435	Arabidopsis lyrata	54.29	9.00e-48	181.00
IUUC-Ath-007482	Arabidopsis thaliana	57.79	8.00e-49	185.00
IUUC-Bdi-014906	Brachypodium distachyon	42.42	4.00e-27	114.00
IUUC-Bol-016273	Brassica oleracea	51.67	5.00e-42	162.00
IUUC-Bra-016627	Brassica rapa	52.22	5.00e-43	165.00
IUUC-Cel-018450	Caenorhabditis elegans	30.77	1.30e+00	26.60
IUUC-Gmo-039360	Gadus morhua	42.00	6.00e-05	41.20
IUUC-Gac-041737	Gasterosteus aculeatus	43.18	5.00e-05	41.20
IUUC-Gma-043301	Glycine max	59.24	2.00e-53	201.00
IUUC-Hsa-046251	Homo sapiens	34.43	1.00e-04	38.90
IUUC-Hvu-047070	Hordeum vulgare	41.54	9.00e-24	102.00
IUUC-Mtr-057791	Medicago truncatula	61.67	4.00e-56	209.00
IUUC-Mac-064781	Musa acuminata	57.25	6.00e-33	132.00
IUUC-Opr-070849	Ochotona princeps	33.75	2.00e-04	39.30
IUUC-Ont-071234	Oreochromis niloticus	42.00	2.00e-04	39.70
IUUC-Oan-072882	Ornithorhynchus anatinus	35.00	6.00e-05	40.00
IUUC-Obr-076578	Oryza brachyantha	42.75	3.00e-28	118.00
IUUC-Ogl-077389	Oryza glaberrima	43.51	8.00e-19	86.30
IUUC-Oin-079212	Oryza indica	43.51	8.00e-19	86.30
IUUC-Ola-087439	Oryzias latipes	35.29	2.00e-04	39.70
IUUC-Ptr-090512	Pan troglodytes	27.45	5.00e-03	35.40
IUUC-Pfo-096195	Poecilia formosa	44.00	5.00e-05	41.60
IUUC-Ppe-102068	Prunus persica	68.53	3.00e-52	196.00
IUUC-Smo-108701	Selaginella moellendorffii	43.94	6.00e-21	92.80
IUUC-Sit-110635	Setaria italica	48.72	7.00e-20	89.70
IUUC-Sly-111686	Solanum lycopersicum	60.16	7.00e-27	113.00
IUUC-Stu-111934	Solanum tuberosum	58.94	1.00e-27	115.00
IUUC-Sbi-113872	Sorghum bicolor	53.33	5.00e-16	77.40
IUUC-Tni-119768	Tetraodon nigroviridis	44.00	2.00e-04	39.70
IUUC-Tca-121336	Theobroma cacao	67.31	1.00e-60	224.00
IUUC-Tvi-122264	Trichoderma virens	38.46	2.00e-03	37.40
IUUC-Vvi-131285	Vitis vinifera	60.64	2.00e-50	190.00
IUUC-Xma-133836	Xiphophorus maculatus	44.00	5.00e-05	41.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence