iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028391

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 47; Zgc:56368

Genbank Nucleotide ID

BX511060

Gene Name

trim47; zgc:56368

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000056678.5	ENSDART00000079207.4	ENSDARP00000073663.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-08	33.6	12	81
E3 activity/RING/RING	3.90e-08	34.6	17	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqa 67
            +e++C+I l+ + dPv+l++G+ + r +I  + +++g      +cP +r  +++ +++ n+ +++l+++
   Q: 12   QKELVCSICLDYFDDPVILKCGHNFCRMCILMHWEENGGddvgyQCPECRMVFAKMSFTKNYLVKNLVDK 81
           5899***************************9996666669999**********************9986 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ f+d p++l CgH f++ C+  +w   +       +CP Cr
   Q: 17   CSICLDYFDD-PVILKCGHNFCRMCIlMHW-EENGGDDVGYQCPECR 61
           **********.999***********9999*.77777777889****8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MATAGDSRGE LQKELVCSIC LDYFDDPVIL KCGHNFCRMC ILMHWEENGG DDVGYQCPEC 60
RMVFAKMSFT KNYLVKNLVD KLSDFDYLKT CRPSAPAKPV KMDGKCERHH EELKLYCHTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCTCTCC TCCGTCTAGA GTCGCTTGTG GCGCTGTAAA GCAGTAACAC GGTTTAGGGA 60
AACATGGCCA CCGCCGGAGA TTCGCGAGGA GAGCTTCAGA AGGAACTGGT TTGCTCCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

dre:393254

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011001	Astyanax mexicanus	87.12	2.00e-136	478.00
IUUC-Cel-018621	Caenorhabditis elegans	31.90	2.00e-09	57.00
IUUC-Gmo-039179	Gadus morhua	68.27	0.00e+00	647.00
IUUC-Gac-042093	Gasterosteus aculeatus	69.23	0.00e+00	640.00
IUUC-Ont-072162	Oreochromis niloticus	72.77	0.00e+00	649.00
IUUC-Pfo-097051	Poecilia formosa	71.31	0.00e+00	691.00
IUUC-Tru-117564	Takifugu rubripes	62.47	7.00e-165	573.00
IUUC-Tni-120905	Tetraodon nigroviridis	64.00	5.00e-166	577.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence