iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135022

Ensembl Protein ID

Zm00001d033319_T001

UniProt Accession

C0HHC6; C0HHC6_MAIZE

Genbank Protein ID

ACN26429.1; ONM07230.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

BT061732; CM007647

Gene Name

ZEAMMB73_Zm00001d033319

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d033319	Zm00001d033319_T001	Zm00001d033319_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.50e-16	61.2	133	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt....ltelkn.sevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           +vkvs++g+++++++dl+ + ++++L++a+++      + +n se+a++YeD+dGDl+ l++D++++++ s       +++l+i+k
   Q: 133  FVKVSMDGAPYLRKVDLRMYRGYRELREALEAlfvsSSSANNlSEFAVTYEDKDGDLM-LVGDVPFEMFAS------TCKKLRIMK 211
           8*******************************87543366667***************.************......9******98 PP

Organism

Zea mays

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

METVVGDLMA TELRLGLPGT VDDCSQPQLV KATPPSTPRG KRRATADAVE EAAGAEEASK 60
RDAETAPPAA KAPVVGWPPV RSYRKSCFQQ ASSKQAAAAK QEAAAAAPGC TASSAAATNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACACACCA GAGACCAGCT CATCATCACA TTCGCATACA TCTCTTCTAG CACGCAAAGA 60
TCGAGCTATA GCTAGCTCTG CAACAAGAGA GAAGGAGGAC TACCCTTCGC CGGCCGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	58.70	2.00e-57	214.00
IUUC-Apl-003220	Anas platyrhynchos	33.33	6.60e-02	31.20
IUUC-Aca-004830	Anolis carolinensis	33.33	8.40e-02	30.40
IUUC-Cin-025204	Ciona intestinalis	27.16	2.40e-02	33.10
IUUC-Csv-025833	Ciona savignyi	30.16	4.00e-02	31.20
IUUC-Fal-037426	Ficedula albicollis	33.33	1.10e-01	30.80
IUUC-Gga-040715	Gallus gallus	33.33	9.40e-02	30.80
IUUC-Gac-041966	Gasterosteus aculeatus	33.33	8.30e-02	30.40
IUUC-Oba-075812	Oryza barthii	59.13	3.00e-56	211.00
IUUC-Obr-076144	Oryza brachyantha	60.96	7.00e-58	216.00
IUUC-Ogl-077720	Oryza glaberrima	58.70	3.00e-56	211.00
IUUC-Ogu-078185	Oryza glumaepatula	60.71	9.00e-56	209.00
IUUC-Oin-079692	Oryza indica	58.70	3.00e-56	211.00
IUUC-Opu-083449	Oryza punctata	59.56	8.00e-52	196.00
IUUC-Oru-084430	Oryza rufipogon	58.70	3.00e-56	211.00
IUUC-Osa-085715	Oryza sativa	58.70	3.00e-56	211.00
IUUC-Oar-090035	Ovis aries	33.33	6.70e-02	31.20
IUUC-Pan-092436	Papio anubis	32.20	2.60e+00	26.20
IUUC-Psi-093566	Pelodiscus sinensis	33.33	8.30e-02	30.80
IUUC-Sce-106197	Saccharomyces cerevisiae	31.91	1.20e+00	28.50
IUUC-Sha-106844	Sarcophilus harrisii	33.33	3.20e-02	30.00
IUUC-Sit-109769	Setaria italica	76.86	1.00e-63	234.00
IUUC-Sbi-114219	Sorghum bicolor	73.68	1.00e-61	228.00
IUUC-Tgu-117454	Taeniopygia guttata	33.33	1.00e-01	30.80
IUUC-Tru-117548	Takifugu rubripes	31.58	3.10e-01	29.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence