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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018455
UUCD1 version UUC-CaE-00093
Ensembl Protein ID W06B4.3
UniProt Accession Q23194; G4SQH0; Q23194_CAEEL
Genbank Protein ID CCD73641.1
Protein Name Related to yeast Vacuolar Protein Sorting factor
Genbank Nucleotide ID BX284602
Gene Name vps-18; CELE_W06B4.3; W06B4.3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00021058 W06B4.3 W06B4.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 26.11 4.00e-86 317.00 IUUC-Hsa-046635
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MIKNTAKNKN GIITRATIDL KKDLKFVKLT AVSNLAVQNG EMLAAVTEKL LVHYSEGTGE 60
RHQEMSLPLN GPDHVAYIHL SRTGFHAIVS SKLGHNFYIH LKSNAFHHLK KLRCVVTAVG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018455|E3,RING|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGATCAAAA ACACTGCGAA AAACAAAAAT GGAATTATTA CTCGGGCAAC TATCGACTTG 60
AAAAAAGATT TGAAGTGAGT TTTTCGATTT TTTTTTTTTT AACCCAATCA TTTTCAGATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018455|E3,RING|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR007810--Pep3_Vps18
IPR011990--TPR-like_helical_dom
IPR019453--VPS39/TGF_beta_rcpt-assoc_2
IPR013083--Znf_RING/FYVE/PHD
Pfam

PF05131--Pep3_Vps18
PF10367--Vps39_2
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005768--C:endosome
GO:0030897--C:HOPS complex
GO:0030674--F:protein binding, bridging
GO:0007032--P:endosome organization
GO:0007040--P:lysosome organization
GO:0090389--P:phagosome-lysosome fusion involved in apoptotic cell clearance
GO:0035542--P:regulation of SNARE complex assembly
GO:0006904--P:vesicle docking involved in exocytosis
KEGG cel:CELE_W06B4.3
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000419 Aegilops tauschii 23.85 3.00e-31 129.00
IUUC-Aml-001240 Ailuropoda melanoleuca 25.86 1.00e-85 310.00
IUUC-Atr-003125 Amborella trichopoda 23.16 7.00e-37 147.00
IUUC-Apl-004181 Anas platyrhynchos 26.22 2.00e-87 315.00
IUUC-Aca-004437 Anolis carolinensis 24.44 1.00e-82 300.00
IUUC-Aly-006046 Arabidopsis lyrata 24.09 6.00e-48 184.00
IUUC-Ath-006932 Arabidopsis thaliana 24.05 9.00e-47 181.00
IUUC-Ago-007800 Ashbya gossypii 20.45 4.00e-27 115.00
IUUC-Acl-008035 Aspergillus clavatus 24.72 4.00e-54 205.00
IUUC-Afl-008714 Aspergillus flavus 23.14 7.00e-52 197.00
IUUC-Afu-009063 Aspergillus fumigatus 25.23 3.00e-55 209.00
IUUC-Ani-009384 Aspergillus nidulans 24.26 4.00e-57 215.00
IUUC-Ang-009507 Aspergillus niger 25.39 6.00e-57 214.00
IUUC-Aor-010094 Aspergillus oryzae 23.24 1.00e-52 200.00
IUUC-Ate-010421 Aspergillus terreus 24.92 5.00e-52 197.00
IUUC-Ame-011797 Astyanax mexicanus 25.17 3.00e-88 318.00
IUUC-Bgr-012107 Blumeria graminis 25.17 8.00e-53 201.00
IUUC-Bta-012339 Bos taurus 26.10 2.00e-88 319.00
IUUC-Bci-013895 Botrytis cinerea 25.64 3.00e-60 225.00
IUUC-Bdi-014554 Brachypodium distachyon 25.13 9.00e-42 164.00
IUUC-Bol-015270 Brassica oleracea 23.48 7.00e-47 181.00
IUUC-Bra-017424 Brassica rapa 23.54 2.00e-46 179.00
IUUC-Cja-019629 Callithrix jacchus 25.81 2.00e-86 312.00
IUUC-Cfa-020425 Canis familiaris 25.76 3.00e-85 308.00
IUUC-Cpo-021349 Cavia porcellus 26.04 3.00e-86 312.00
IUUC-Cre-022799 Chlamydomonas reinhardtii 27.56 1.00e-14 73.90
IUUC-Csa-023559 Chlorocebus sabaeus 26.01 8.00e-87 313.00
IUUC-Cho-024862 Choloepus hoffmanni 24.38 6.00e-37 148.00
IUUC-Cin-025599 Ciona intestinalis 24.71 4.00e-64 238.00
IUUC-Csv-026152 Ciona savignyi 23.58 6.00e-76 278.00
IUUC-Cgl-026551 Colletotrichum gloeosporioides 25.08 4.00e-45 175.00
IUUC-Cne-026907 Cryptococcus neoformans 27.21 5.00e-52 198.00
IUUC-Dre-027747 Danio rerio 25.88 4.00e-92 331.00
IUUC-Dno-029668 Dasypus novemcinctus 25.73 2.00e-84 305.00
IUUC-Dor-030404 Dipodomys ordii 26.69 8.00e-85 307.00
IUUC-Dse-031345 Dothistroma septosporum 24.64 1.00e-53 203.00
IUUC-Dme-031711 Drosophila melanogaster 27.59 4.00e-84 305.00
IUUC-Ete-032308 Echinops telfairi 26.96 2.00e-51 196.00
IUUC-Eca-033637 Equus caballus 25.93 4.00e-85 308.00
IUUC-Eeu-035151 Erinaceus europaeus 27.85 4.00e-78 285.00
IUUC-Fca-035585 Felis catus 25.57 1.00e-85 309.00
IUUC-Fal-037122 Ficedula albicollis 25.77 7.00e-82 297.00
IUUC-Fox-038030 Fusarium oxysporum 24.67 4.00e-56 212.00
IUUC-Fso-038426 Fusarium solani 26.58 5.00e-63 234.00
IUUC-Gmo-038784 Gadus morhua 26.65 1.00e-84 306.00
IUUC-Ggr-039973 Gaeumannomyces graminis 25.84 4.00e-49 188.00
IUUC-Gga-040692 Gallus gallus 25.56 9.00e-88 317.00
IUUC-Gac-041868 Gasterosteus aculeatus 25.53 3.00e-88 318.00
IUUC-Gma-044274 Glycine max 23.83 1.00e-54 206.00
IUUC-Ggo-045053 Gorilla gorilla 26.04 3.00e-86 311.00
IUUC-Hsa-046635 Homo sapiens 26.04 2.00e-86 312.00
IUUC-Hvu-047361 Hordeum vulgare 22.96 2.00e-39 156.00
IUUC-Itr-048868 Ictidomys tridecemlineatus 25.94 8.00e-86 310.00
IUUC-Kpa-049270 Komagataella pastoris 22.07 3.00e-33 135.00
IUUC-Lch-050188 Latimeria chalumnae 26.12 4.00e-80 291.00
IUUC-Lpe-051026 Leersia perrieri 24.48 8.00e-47 181.00
IUUC-Loc-051821 Lepisosteus oculatus 24.66 6.00e-86 311.00
IUUC-Lma-053178 Leptosphaeria maculans 25.22 5.00e-48 184.00
IUUC-Laf-053552 Loxodonta africana 25.94 2.00e-84 306.00
IUUC-Mcc-054667 Macaca mulatta 26.04 2.00e-86 313.00
IUUC-Meu-056422 Macropus eugenii 28.02 3.00e-52 199.00
IUUC-Mor-056981 Magnaporthe oryzae 25.03 5.00e-54 204.00
IUUC-Mtr-058703 Medicago truncatula 23.69 2.00e-48 186.00
IUUC-Mla-059088 Melampsora laricipopulina 27.75 3.00e-53 202.00
IUUC-Mga-059798 Meleagris gallopavo 25.66 2.00e-88 319.00
IUUC-Mvi-060404 Microbotryum violaceum 24.10 5.00e-51 195.00
IUUC-Mmr-061630 Microcebus murinus 25.84 4.00e-85 308.00
IUUC-Mdo-062354 Monodelphis domestica 26.16 6.00e-90 324.00
IUUC-Mmu-063199 Mus musculus 26.25 2.00e-85 309.00
IUUC-Mac-065595 Musa acuminata 25.51 2.00e-44 172.00
IUUC-Mpu-066596 Mustela putorius furo 25.76 4.00e-85 308.00
IUUC-Mlu-067455 Myotis lucifugus 25.89 1.00e-85 309.00
IUUC-Nfi-068565 Neosartorya fischeri 25.51 2.00e-56 213.00
IUUC-Ncr-068748 Neurospora crassa 24.13 5.00e-55 208.00
IUUC-Nle-068979 Nomascus leucogenys 26.21 6.00e-77 281.00
IUUC-Opr-070711 Ochotona princeps 25.51 4.00e-82 298.00
IUUC-Ont-072603 Oreochromis niloticus 25.36 7.00e-90 324.00
IUUC-Oan-073136 Ornithorhynchus anatinus 28.33 2.00e-53 201.00
IUUC-Ocu-074496 Oryctolagus cuniculus 25.86 1.00e-84 306.00
IUUC-Oba-075933 Oryza barthii 24.64 5.00e-41 161.00
IUUC-Obr-076290 Oryza brachyantha 25.58 3.00e-48 185.00
IUUC-Ogu-078728 Oryza glumaepatula 24.76 1.00e-41 163.00
IUUC-Oin-079954 Oryza indica 25.42 2.00e-41 163.00
IUUC-Olo-081033 Oryza longistaminata 22.48 3.00e-27 115.00
IUUC-Ome-081797 Oryza meridionalis 25.09 5.00e-48 185.00
IUUC-Oni-082802 Oryza nivara 24.76 1.00e-41 163.00
IUUC-Opu-083595 Oryza punctata 25.96 5.00e-45 175.00
IUUC-Oru-084199 Oryza rufipogon 24.76 1.00e-41 163.00
IUUC-Osa-085349 Oryza sativa 26.02 3.00e-47 182.00
IUUC-Ola-087482 Oryzias latipes 25.27 2.00e-89 322.00
IUUC-Olu-087797 Ostreococcus lucimarinus 22.46 4.00e-39 155.00
IUUC-Oga-088817 Otolemur garnettii 25.78 1.00e-85 310.00
IUUC-Oar-090350 Ovis aries 25.34 2.00e-57 216.00
IUUC-Ptr-090999 Pan troglodytes 25.94 3.00e-85 308.00
IUUC-Pan-092704 Papio anubis 26.04 2.00e-86 313.00
IUUC-Psi-093529 Pelodiscus sinensis 24.80 2.00e-83 303.00
IUUC-Pma-094400 Petromyzon marinus 24.95 4.00e-82 298.00
IUUC-Pno-094875 Phaeosphaeria nodorum 23.43 5.00e-55 208.00
IUUC-Ppa-095231 Physcomitrella patens 23.63 8.00e-50 191.00
IUUC-Pfo-096967 Poecilia formosa 25.12 8.00e-90 323.00
IUUC-Pab-098300 Pongo abelii 26.04 8.00e-87 313.00
IUUC-Pop-098966 Populus trichocarpa 23.18 4.00e-48 185.00
IUUC-Pca-100643 Procavia capensis 26.30 3.00e-78 285.00
IUUC-Ppe-101589 Prunus persica 25.35 1.00e-46 180.00
IUUC-Pva-102766 Pteropus vampyrus 25.35 2.00e-77 283.00
IUUC-Pgr-103330 Puccinia graminis 23.18 4.00e-48 186.00
IUUC-Ptt-103809 Puccinia triticina 24.62 8.00e-44 171.00
IUUC-Pte-104319 Pyrenophora teres 24.06 3.00e-56 212.00
IUUC-Pyt-104798 Pyrenophora triticirepentis 22.89 3.00e-47 182.00
IUUC-Rno-105817 Rattus norvegicus 26.03 2.00e-85 309.00
IUUC-Sce-106255 Saccharomyces cerevisiae 21.02 3.00e-29 122.00
IUUC-Sha-107479 Sarcophilus harrisii 25.98 1.00e-89 323.00
IUUC-Sja-107976 Schizosaccharomyces japonicus 20.73 5.00e-26 112.00
IUUC-Spo-108146 Schizosaccharomyces pombe 25.31 1.00e-37 150.00
IUUC-Ssl-108663 Sclerotinia sclerotiorum 25.93 4.00e-54 205.00
IUUC-Smo-109585 Selaginella moellendorffii 24.58 4.00e-52 198.00
IUUC-Sit-110275 Setaria italica 23.64 4.00e-43 169.00
IUUC-Sly-111073 Solanum lycopersicum 23.85 9.00e-51 194.00
IUUC-Sar-113718 Sorex araneus 25.42 6.00e-80 291.00
IUUC-Sbi-114080 Sorghum bicolor 23.96 7.00e-46 178.00
IUUC-Sre-115160 Sporisorium reilianum 25.90 2.00e-52 200.00
IUUC-Ssc-115997 Sus scrofa 26.00 7.00e-86 310.00
IUUC-Tgu-116904 Taeniopygia guttata 26.54 7.00e-84 303.00
IUUC-Tru-117946 Takifugu rubripes 24.63 1.00e-85 310.00
IUUC-Tni-119692 Tetraodon nigroviridis 25.54 2.00e-84 306.00
IUUC-Tca-121455 Theobroma cacao 23.61 2.00e-52 199.00
IUUC-Tre-122128 Trichoderma reesei 23.67 5.00e-43 168.00
IUUC-Tvi-122657 Trichoderma virens 23.86 2.00e-53 202.00
IUUC-Tae-125953 Triticum aestivum 23.68 7.00e-40 158.00
IUUC-Tur-126110 Triticum urartu 25.00 4.00e-30 125.00
IUUC-Tme-127173 Tuber melanosporum 23.41 8.00e-42 164.00
IUUC-Ttr-128420 Tursiops truncatus 26.20 1.00e-88 320.00
IUUC-Uma-129580 Ustilago maydis 26.18 1.00e-54 207.00
IUUC-Vda-129790 Verticillium dahliae 23.79 2.00e-50 192.00
IUUC-Vvi-131095 Vitis vinifera 23.00 8.00e-52 197.00
IUUC-Xtr-131906 Xenopus tropicalis 26.25 2.00e-87 316.00
IUUC-Xma-134197 Xiphophorus maculatus 25.22 8.00e-89 320.00
IUUC-Yli-134617 Yarrowia lipolytica 22.33 8.00e-38 151.00
IUUC-Zma-134979 Zea mays 29.29 4.00e-23 102.00
Created Date 25-Jun-2017

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