iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022817

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Carotenoid cleavage dioxygenase

Genbank Nucleotide ID

DS496134

Gene Name

CCD1; CHLREDRAFT_205922

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_205922	EDP01352	EDP01352

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	32.20	5.20e+00	27.70	IUUC-Sce-106181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MTSSADSPAW SLPQFPMTRT LLHYAAPVAC VATTALLVAT RKDLITWVYN TIAKSGTKKA 60
GKAYLSGNFG PVPDELFAED LEVVEGKLPA GLDGFYVRVG PNPLFQPVAG YHWFDGDGML 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACATCGTG AGATTATTTA TTACCTTGAA TTGAAATCTA GTGCCGCAGG CTCGTGACCT 60
CACAGAATCG CTCTAGGACA AATGACTTCC TCAGCGGATA GCCCCGCCTG GAGCCTGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0223--Dioxygenase
KW-0472--Membrane
KW-0560--Oxidoreductase
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR004294--Carotenoid_Oase

Pfam

PF03055--RPE65

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
GO:0005774--C:vacuolar membrane
GO:0045549--F:9-cis-epoxycarotenoid dioxygenase activity
GO:0016121--P:carotene catabolic process
GO:0016124--P:xanthophyll catabolic process

KEGG

cre:CHLREDRAFT_205922

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	30.51	2.20e-02	30.40
IUUC-Atr-002537	Amborella trichopoda	44.07	8.00e-03	32.70
IUUC-Apl-003474	Anas platyrhynchos	23.53	7.30e-02	30.80
IUUC-Aca-005019	Anolis carolinensis	25.64	4.90e-02	31.20
IUUC-Ame-010832	Astyanax mexicanus	24.14	3.80e-02	31.60
IUUC-Bgr-011983	Blumeria graminis	24.64	2.70e-01	30.00
IUUC-Bdi-014540	Brachypodium distachyon	37.14	3.30e-01	26.90
IUUC-Cpo-022174	Cavia porcellus	23.53	1.50e-01	29.60
IUUC-Csa-023789	Chlorocebus sabaeus	23.53	1.50e-01	29.60
IUUC-Dno-029660	Dasypus novemcinctus	28.33	6.50e-02	30.80
IUUC-Dor-030230	Dipodomys ordii	23.53	1.00e-01	30.00
IUUC-Ete-032944	Echinops telfairi	25.00	9.90e-02	30.00
IUUC-Eca-033636	Equus caballus	23.53	1.60e-01	29.60
IUUC-Fca-035493	Felis catus	43.48	6.40e-01	26.60
IUUC-Fal-036640	Ficedula albicollis	23.53	8.50e-02	30.40
IUUC-Gga-040781	Gallus gallus	23.53	6.80e-02	30.40
IUUC-Hvu-047252	Hordeum vulgare	33.33	1.40e-01	28.10
IUUC-Lch-050652	Latimeria chalumnae	32.56	2.40e-02	32.30
IUUC-Lpe-050946	Leersia perrieri	29.33	2.70e-01	28.90
IUUC-Mcc-055565	Macaca mulatta	25.00	1.90e-01	29.30
IUUC-Mga-060111	Meleagris gallopavo	23.53	6.30e-02	30.80
IUUC-Mvi-060364	Microbotryum violaceum	57.89	2.80e-01	27.30
IUUC-Mmr-060793	Microcebus murinus	23.53	1.60e-01	29.30
IUUC-Mdo-061941	Monodelphis domestica	23.53	8.20e-02	30.40
IUUC-Mpu-066625	Mustela putorius furo	23.53	1.50e-01	29.30
IUUC-Ncr-068812	Neurospora crassa	30.23	1.20e-01	28.10
IUUC-Opr-070332	Ochotona princeps	43.48	9.30e-01	26.60
IUUC-Ocu-074139	Oryctolagus cuniculus	25.00	1.20e-01	29.60
IUUC-Pan-092050	Papio anubis	23.53	1.40e-01	29.60
IUUC-Psi-093688	Pelodiscus sinensis	23.53	7.10e-02	30.40
IUUC-Pca-100479	Procavia capensis	23.53	7.90e-02	30.40
IUUC-Sce-106181	Saccharomyces cerevisiae	32.20	1.60e-01	28.10
IUUC-Sha-107254	Sarcophilus harrisii	23.53	7.90e-02	30.40
IUUC-Tgu-117391	Taeniopygia guttata	23.53	5.70e-02	30.80
IUUC-Tsy-118895	Tarsius syrichta	43.48	8.10e-01	26.20
IUUC-Tae-122969	Triticum aestivum	30.51	2.70e-02	30.40
IUUC-Tur-126346	Triticum urartu	30.51	2.20e-02	30.40
IUUC-Tbe-127405	Tupaia belangeri	25.00	1.00e-01	29.60
IUUC-Xtr-131804	Xenopus tropicalis	30.23	1.50e-01	29.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence