iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043676

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000842

Gene Name

LOC100775214; GLYMA_09G057500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA09G06410	GLYMA09G06410.2	GLYMA09G06410.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-29	101.8	304	339
UBD/Beta-Prp	2.20e-50	173.2	193	376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H+++vtc+ +  s   +++G+ Dg +++WD+r+g ++
   Q: 304  HEGGVTCMTWvgS-SCVATGCVDGIVRLWDIRSGECV 339
           9*********964.679*****************997 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           s + + + tgs+d+t+++w+ +  +       h+++ t++ +s+++ + +tgseD+ +++  ++ gk +  +  h ds+ ++ fsps++  ++G
   Q: 193  SWQWETICTGSADKTLRIWNSSGTSH----GYHTKGLTCLAISSNSTLALTGSEDGSAYIVKIDGGKVIDFVASHPDSIECVGFSPSDSLAAIG 282
           55668899***************555....99************************************************************** PP
   S: 113  shdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvkl 206
           + d+ + +wd+++          h+g v+c+++ + ++++++G+ D++vrlWd+++g+++++++g h d+++sls++ ng ++vs+sld t ++
   Q: 283  GMDQRLVIWDIQHFLSRA--TCDHEGGVTCMTWVG-SSCVATGCVDGIVRLWDIRSGECVEKFRG-HSDAIQSLSVSANGDYIVSVSLDHTARV 372
           *************98886..7789999********.99**************************9.**************************** PP
   S: 207  wdlq 210
           ++++
   Q: 373  FEVR 376
           9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSGHVAPPIY EYNDEVISDE FFLDESDILH ELSMDDEDLP DVDDDSETEH VEEVDDAIDT 60
FKSHNGELYA VACSPTDATL VATGGGDDRG FLWKIGEKGD WVSELQGHKD SVSSLAFSYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGGTC ATGTCGCTCC ACCTATTTAT GAATATAATG ATGAAGTCAT CAGTGATGAA 60
TTTTTTCTTG ATGAGTCTGA TATCCTCCAT GAACTTTCCA TGGACGATGA AGATCTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence