iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044117

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000835

Gene Name

LOC100813925; GLYMA_02G282600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G45200	GLYMA02G45200.1	GLYMA02G45200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-26	92.1	519	551
UBD/Beta-Prp	1.30e-46	160.7	255	463

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH++sv+c+++   + ++l+s+sdD ti+vW l
   Q: 519  GHSGSVNCVSWnpaNPHMLASASDDRTIRVWGL 551
           8***********963399*************97 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvw..dls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetl 133
           ++l+ l+ h++ev+ v+fs++gk+l+++s+Drt+ +w   ++   +  h l+gh++ v s+s+sp+++ +++ + d+ ir wd++tg+cl+  +
   Q: 255  STLQILEAHDDEVWFVQFSHNGKYLASASNDRTAIIWvvGINgRLTVKHRLSGHQKPVSSVSWSPNDQEILTCGVDEAIRRWDVSTGKCLQIYE 348
           56899********************************765553344557788***************************************889 PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
           +   g+v+c  +++ g+++  G  D+ + +W l  gk ++ ++g++t ++  l+++++g+e++s+ + + v l++ +t++  +++++  ++++s
   Q: 349  KAGAGLVSCSWFPC-GKYILCGLSDKSICMWEL-DGKEVESWKGQKTLKISDLEITDDGEEILSICKANVVLLFNRETKD--ERFIEEYETITS 438
           99999999988888.*****************9.99******************************************97..9*********** PP
   S: 228  vrfspnderlvsgssDgsiriWdlr 252
             +s+++++l++    + i +W+++
   Q: 439  FSLSKDNKFLLVNLLNQEIHLWNIE 463
           ************99********987 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGGVEDEEPS MKRMKLSSKG LVGLSNGSSK EPVRGLSSDL MAQPLLSKED EHVVGSKGVI 60
KKEEFVRIIA KALYSLGYGK SGAHLEEESG IPLQSPGVNL FRQQILDGNW DDSVATLYKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAATTGGGT GTAAAATGTT ATAAGTGCCA ATTATTTGTC AATTTTATTA ATTATTAATT 60
TTTATCACAT AAGTTTGGCT AATTATATTT CACTAATCAA CATTTATTTT TTCATTAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

KEGG

gmx:100813925

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002649	Amborella trichopoda	60.14	0.00e+00	704.00
IUUC-Csv-026251	Ciona savignyi	38.29	3.00e-78	285.00
IUUC-Sly-111282	Solanum lycopersicum	64.31	0.00e+00	721.00
IUUC-Uma-129354	Ustilago maydis	32.78	6.00e-34	139.00
IUUC-Yli-134521	Yarrowia lipolytica	35.83	2.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence