iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043701

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000843

Gene Name

LOC100816419; GLYMA_10G192200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G33580	GLYMA10G33580.1	GLYMA10G33580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-28	96.8	331	367
UBD/Beta-Prp	1.10e-43	151.1	278	493

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f +d t ++s+++D++ik WD+ tg +
   Q: 331  GHSKAVRDICFsNDgTKFLSAGYDKNIKYWDTETGQV 367
           8***********999*****************99976 PP

UBD/Beta-Prp

   S: 41   tgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdl.stgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleet 132
           ++ l+++ sgh+++v+a++f p++  ++++++ D  ik+wd+ ++gkc++t+ gh++ v+++ fs +g k++s++ d+ i+ wd+etgq+++++
   Q: 278  PKRLIHTWSGHTKGVSAIRFFPKYGhLILSAGMDTKIKIWDVfNSGKCMRTYMGHSKAVRDICFSNDGTKFLSAGYDKNIKYWDTETGQVISTF 371
           5667888888888888888888876688888888888888652578888888888888888888888888888888888888888888888877 PP
   S: 133  lsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdn 224
            +g+   v  ++ ++d+ n+l +G+ D+++  Wd++tg++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +++   + h   
   Q: 372  ATGKIPYVVKLNPDEDKqNVLLAGMSDKKIVQWDMNTGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEpHMHS 464
           7888888888888888888888888888888888888888888877.88888888888888888888888888888888776655554458888 PP
   S: 225  vksvrfspnderlvsgssDgsiriWdlrs 253
           + s+ ++pn ++l+  s D++i i+ +r 
   Q: 465  MPSISLHPNANWLAAQSLDNQILIYSTRE 493
           88888888888888888888888885544 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDLLHQYSDG DDPDSPSQNP SSPPRLLAGR SAAPKVDDTM LALTVTSSSS AALSRPIDPT 60
QHLVGFNPSY DQLWAPIQGP AHPFAKDGIA QGMRNHKLGF VEDASIEPFL FDEQYNTFHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGGGTTTG TGTTATCGCA TTTGTTTGTC CTTTCCCGAT CGTTAAACCT CCCCCACTGC 60
AATTGCAAAT CCCTGATAAT TAAACCAAAG AACCATTCCG CTCCAATCTT AAAAGCACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

gmx:100816419

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	73.11	0.00e+00	815.00
IUUC-Bol-015695	Brassica oleracea	76.03	0.00e+00	903.00
IUUC-Kpa-049318	Komagataella pastoris	46.41	2.00e-90	326.00
IUUC-Lma-053107	Leptosphaeria maculans	50.14	7.00e-106	377.00
IUUC-Ncr-068675	Neurospora crassa	48.28	2.00e-91	330.00
IUUC-Opr-070685	Ochotona princeps	48.74	5.00e-150	524.00
IUUC-Oin-079898	Oryza indica	82.37	0.00e+00	686.00
IUUC-Olo-081080	Oryza longistaminata	73.27	0.00e+00	756.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.31	2.00e-104	372.00
IUUC-Ppa-095386	Physcomitrella patens	70.32	0.00e+00	868.00
IUUC-Pgr-103456	Puccinia graminis	49.72	8.00e-148	517.00
IUUC-Pte-104386	Pyrenophora teres	50.29	2.00e-103	369.00
IUUC-Sbi-114005	Sorghum bicolor	73.32	0.00e+00	801.00
IUUC-Uma-129622	Ustilago maydis	45.04	2.00e-138	486.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence