iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H+dsv   ++ ++ ++l++G+ D t kvWD+r
   Q: 299  HSDSVLTGSWhPNgNILATGGQDTTAKVWDIR 330
           899988889**777****************86 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MSNGEFIDQY LLPESGAILQ DYLDDYFYTS WYTGNRNLIQ LDHYGFPTAS NFELNPKSTD 60
NCGTVDFQGI PWGNKAIGKR KNFRLYRLHT YSLSCNHSDW SPEELSLDTV QVAAEDSFYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGATCTTGTC CTTCTCTAAT TTTTTATTTG ATTTCCTTTT TGTTCTACAG CCATACAGAT 60
AATATTTATT TTAAATTAAA TATTTCTATA TGTCCAATGG AGAATTTATA GACCAGTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0043234--C:protein complex

KEGG

spo:SPBC2A9.03

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	28.07	5.00e-35	140.00
IUUC-Atr-003022	Amborella trichopoda	29.18	2.00e-36	144.00
IUUC-Aly-006341	Arabidopsis lyrata	31.30	1.00e-38	151.00
IUUC-Ath-006618	Arabidopsis thaliana	30.48	3.00e-32	130.00
IUUC-Bdi-014366	Brachypodium distachyon	30.85	1.00e-39	155.00
IUUC-Bol-015183	Brassica oleracea	30.16	9.00e-38	149.00
IUUC-Bra-017403	Brassica rapa	28.54	3.00e-39	153.00
IUUC-Cre-022745	Chlamydomonas reinhardtii	26.07	2.00e-11	61.20
IUUC-Cme-027214	Cyanidioschyzon merolae	31.98	4.00e-18	84.70
IUUC-Dse-031456	Dothistroma septosporum	26.82	3.00e-29	120.00
IUUC-Gma-043498	Glycine max	29.44	7.00e-38	149.00
IUUC-Hvu-047718	Hordeum vulgare	30.45	2.00e-39	154.00
IUUC-Kpa-049267	Komagataella pastoris	24.29	5.00e-16	77.00
IUUC-Lpe-051685	Leersia perrieri	26.72	5.00e-35	139.00
IUUC-Mtr-058564	Medicago truncatula	29.68	3.00e-42	164.00
IUUC-Mac-064914	Musa acuminata	28.39	3.00e-36	144.00
IUUC-Oba-075469	Oryza barthii	28.27	2.00e-41	160.00
IUUC-Obr-076922	Oryza brachyantha	29.26	1.00e-43	168.00
IUUC-Ogl-077207	Oryza glaberrima	28.25	4.00e-34	137.00
IUUC-Ogu-077978	Oryza glumaepatula	28.27	2.00e-41	160.00
IUUC-Oin-079991	Oryza indica	28.25	9.00e-35	139.00
IUUC-Olo-080502	Oryza longistaminata	28.57	5.00e-42	163.00
IUUC-Ome-081872	Oryza meridionalis	27.54	2.00e-34	138.00
IUUC-Oni-082262	Oryza nivara	28.80	4.00e-42	163.00
IUUC-Opu-083138	Oryza punctata	28.39	1.00e-41	162.00
IUUC-Oru-084351	Oryza rufipogon	28.80	3.00e-42	164.00
IUUC-Osa-085692	Oryza sativa	29.26	4.00e-44	170.00
IUUC-Pop-099601	Populus trichocarpa	31.82	9.00e-38	149.00
IUUC-Pte-104305	Pyrenophora teres	23.34	4.00e-29	121.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	24.59	4.00e-30	124.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	36.53	1.00e-73	268.00
IUUC-Smo-109570	Selaginella moellendorffii	27.78	4.00e-33	133.00
IUUC-Sit-110589	Setaria italica	28.94	3.00e-40	157.00
IUUC-Sly-111343	Solanum lycopersicum	29.24	7.00e-37	146.00
IUUC-Stu-112207	Solanum tuberosum	29.50	3.00e-37	147.00
IUUC-Sbi-113791	Sorghum bicolor	29.84	8.00e-40	155.00
IUUC-Tca-121580	Theobroma cacao	29.32	5.00e-36	143.00
IUUC-Tae-124819	Triticum aestivum	29.52	2.00e-41	161.00
IUUC-Tur-126211	Triticum urartu	27.49	3.00e-34	137.00
IUUC-Vvi-131311	Vitis vinifera	29.22	2.00e-37	147.00
IUUC-Yli-134594	Yarrowia lipolytica	34.18	4.00e-17	80.90
IUUC-Zma-135672	Zea mays	29.84	6.00e-40	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence