iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-124110

Ensembl Protein ID

TRIAE_CS42_U_TGACv1_642164_AA2112590.1

UniProt Accession

A0A096USJ7; A0A096USJ7_WHEAT

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_U_TGACv1_642164_AA2112590	TRIAE_CS42_U_TGACv1_642164_AA2112590.1	TRIAE_CS42_U_TGACv1_642164_AA2112590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-13	52.0	358	396

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++vt+l+   ++  ++sGs Dgti+vW++ tg++lk
   Q: 358  GHGGPVTSLSVeaTGQWIASGSSDGTIRVWEVETGRCLK 396
           8*********9976699********************97 PP

Organism

Triticum aestivum

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGRVDGEDKA ALSPGGDDAA DLSPDDSPWS DSAWSEDEDD DEASLSFEDS GEGSDVDSDG 60
LEEEDDAAAE ESDSSEDEVA PRNTVGDVPL KWYKDEEHIG YDISGRKIKK RDRDGKIDSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCAGCAAA GCGAAGCGAA GGAACACTCT TTCCCCTCCG TCCGTCCCCT CCTAAAACCC 60
TAGCAGCCCA GGCGGCGGCC TCCCCCCTCC ACCACCGCGC CGCCCAAACC CCCAGCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001507	Ailuropoda melanoleuca	42.77	3.00e-134	473.00
IUUC-Atr-003141	Amborella trichopoda	63.42	4.00e-159	555.00
IUUC-Apl-003545	Anas platyrhynchos	43.65	6.00e-129	454.00
IUUC-Aly-005649	Arabidopsis lyrata	64.75	0.00e+00	850.00
IUUC-Ath-007625	Arabidopsis thaliana	64.81	0.00e+00	829.00
IUUC-Ago-007958	Ashbya gossypii	39.76	4.00e-136	479.00
IUUC-Acl-008344	Aspergillus clavatus	41.64	8.00e-122	431.00
IUUC-Afl-008616	Aspergillus flavus	40.03	1.00e-121	431.00
IUUC-Afu-009083	Aspergillus fumigatus	41.33	2.00e-118	421.00
IUUC-Ani-009365	Aspergillus nidulans	41.02	5.00e-124	439.00
IUUC-Ang-009796	Aspergillus niger	40.71	3.00e-121	429.00
IUUC-Aor-010015	Aspergillus oryzae	40.03	1.00e-121	431.00
IUUC-Ate-010537	Aspergillus terreus	40.62	6.00e-126	445.00
IUUC-Bgr-012286	Blumeria graminis	42.79	6.00e-138	485.00
IUUC-Bta-013569	Bos taurus	45.95	1.00e-148	520.00
IUUC-Bci-013820	Botrytis cinerea	41.32	9.00e-128	451.00
IUUC-Bol-016099	Brassica oleracea	65.64	0.00e+00	861.00
IUUC-Bra-017174	Brassica rapa	65.53	0.00e+00	868.00
IUUC-Cel-018201	Caenorhabditis elegans	40.94	2.00e-127	450.00
IUUC-Cja-019009	Callithrix jacchus	40.33	1.00e-126	447.00
IUUC-Cfa-020173	Canis familiaris	41.52	8.00e-136	478.00
IUUC-Cpo-021796	Cavia porcellus	44.53	2.00e-146	513.00
IUUC-Csa-023440	Chlorocebus sabaeus	44.86	3.00e-152	533.00
IUUC-Cin-025782	Ciona intestinalis	44.24	8.00e-152	531.00
IUUC-Csv-026352	Ciona savignyi	42.22	7.00e-144	504.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	36.64	2.00e-101	364.00
IUUC-Cne-027004	Cryptococcus neoformans	42.54	1.00e-146	514.00
IUUC-Cme-027242	Cyanidioschyzon merolae	34.37	9.00e-106	378.00
IUUC-Dre-028658	Danio rerio	46.53	7.00e-160	558.00
IUUC-Dno-028883	Dasypus novemcinctus	44.75	3.00e-149	523.00
IUUC-Dor-031031	Dipodomys ordii	43.53	2.00e-147	516.00
IUUC-Dse-031443	Dothistroma septosporum	38.93	2.00e-123	436.00
IUUC-Eca-033677	Equus caballus	44.91	7.00e-148	518.00
IUUC-Eeu-035310	Erinaceus europaeus	41.34	6.00e-112	398.00
IUUC-Fca-035888	Felis catus	44.03	2.00e-145	509.00
IUUC-Fox-037973	Fusarium oxysporum	41.19	2.00e-141	497.00
IUUC-Fso-038187	Fusarium solani	40.72	1.00e-138	488.00
IUUC-Gmo-039114	Gadus morhua	43.46	1.00e-138	487.00
IUUC-Ggr-039746	Gaeumannomyces graminis	41.29	8.00e-142	498.00
IUUC-Gac-042582	Gasterosteus aculeatus	43.91	2.00e-143	503.00
IUUC-Gma-044215	Glycine max	65.96	0.00e+00	837.00
IUUC-Ggo-045587	Gorilla gorilla	45.02	2.00e-152	533.00
IUUC-Hsa-046319	Homo sapiens	45.02	1.00e-152	534.00
IUUC-Hvu-047526	Hordeum vulgare	93.10	0.00e+00	1218.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	45.02	2.00e-149	523.00
IUUC-Kpa-049221	Komagataella pastoris	38.39	2.00e-128	454.00
IUUC-Lch-049640	Latimeria chalumnae	46.71	9.00e-166	577.00
IUUC-Loc-051930	Lepisosteus oculatus	47.15	4.00e-164	572.00
IUUC-Lma-053290	Leptosphaeria maculans	40.31	6.00e-125	442.00
IUUC-Laf-053903	Loxodonta africana	43.16	3.00e-133	469.00
IUUC-Mcc-055471	Macaca mulatta	44.53	2.00e-151	530.00
IUUC-Meu-056190	Macropus eugenii	45.82	8.00e-150	525.00
IUUC-Mor-057135	Magnaporthe oryzae	40.69	6.00e-134	472.00
IUUC-Mpo-057475	Magnaporthe poae	40.19	7.00e-133	468.00
IUUC-Mtr-058689	Medicago truncatula	60.88	0.00e+00	783.00
IUUC-Mla-059149	Melampsora laricipopulina	42.26	2.00e-140	493.00
IUUC-Mmr-061674	Microcebus murinus	44.55	6.00e-146	511.00
IUUC-Mdo-062973	Monodelphis domestica	45.50	1.00e-155	544.00
IUUC-Mmu-064180	Mus musculus	43.61	3.00e-150	526.00
IUUC-Mac-064535	Musa acuminata	54.03	0.00e+00	762.00
IUUC-Mpu-066406	Mustela putorius furo	45.34	2.00e-153	536.00
IUUC-Mlu-067795	Myotis lucifugus	45.63	3.00e-142	499.00
IUUC-Nfi-068516	Neosartorya fischeri	41.49	3.00e-112	400.00
IUUC-Ncr-068767	Neurospora crassa	40.16	1.00e-125	444.00
IUUC-Opr-071084	Ochotona princeps	44.68	7.00e-62	231.00
IUUC-Ont-071614	Oreochromis niloticus	43.59	3.00e-154	539.00
IUUC-Oba-075980	Oryza barthii	80.99	0.00e+00	981.00
IUUC-Obr-076799	Oryza brachyantha	84.22	0.00e+00	1080.00
IUUC-Ogl-077134	Oryza glaberrima	85.78	0.00e+00	1053.00
IUUC-Ogu-078655	Oryza glumaepatula	82.07	0.00e+00	1018.00
IUUC-Olo-080706	Oryza longistaminata	81.14	0.00e+00	987.00
IUUC-Ome-081716	Oryza meridionalis	66.56	0.00e+00	763.00
IUUC-Oni-082508	Oryza nivara	79.78	0.00e+00	979.00
IUUC-Opu-083707	Oryza punctata	81.37	0.00e+00	975.00
IUUC-Oru-084453	Oryza rufipogon	81.14	0.00e+00	987.00
IUUC-Osa-085811	Oryza sativa	85.78	0.00e+00	1053.00
IUUC-Ola-087361	Oryzias latipes	46.12	3.00e-158	552.00
IUUC-Oga-088015	Otolemur garnettii	44.53	2.00e-153	536.00
IUUC-Oar-090058	Ovis aries	49.69	1.00e-44	175.00
IUUC-Ptr-090631	Pan troglodytes	44.53	2.00e-57	216.00
IUUC-Pan-092306	Papio anubis	44.94	2.00e-151	530.00
IUUC-Pma-094622	Petromyzon marinus	45.66	7.00e-159	554.00
IUUC-Pno-094794	Phaeosphaeria nodorum	36.97	7.00e-115	408.00
IUUC-Pab-097939	Pongo abelii	44.09	2.00e-136	479.00
IUUC-Pca-100333	Procavia capensis	45.20	3.00e-151	529.00
IUUC-Ppe-102078	Prunus persica	64.77	0.00e+00	818.00
IUUC-Pgr-103525	Puccinia graminis	42.70	6.00e-130	459.00
IUUC-Pte-104029	Pyrenophora teres	40.09	3.00e-134	473.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	40.22	1.00e-134	474.00
IUUC-Rno-105248	Rattus norvegicus	45.02	1.00e-149	523.00
IUUC-Sce-106381	Saccharomyces cerevisiae	40.18	5.00e-136	479.00
IUUC-Sha-106519	Sarcophilus harrisii	46.85	3.00e-157	549.00
IUUC-Spo-108071	Schizosaccharomyces pombe	40.09	8.00e-129	455.00
IUUC-Sly-110970	Solanum lycopersicum	74.05	9.00e-151	527.00
IUUC-Stu-112593	Solanum tuberosum	69.49	0.00e+00	900.00
IUUC-Sar-113123	Sorex araneus	41.96	5.00e-62	231.00
IUUC-Sre-115188	Sporisorium reilianum	40.66	5.00e-131	462.00
IUUC-Ssc-115352	Sus scrofa	44.57	3.00e-151	529.00
IUUC-Tru-117685	Takifugu rubripes	45.72	2.00e-157	550.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.73	5.00e-154	538.00
IUUC-Tca-121664	Theobroma cacao	69.22	0.00e+00	887.00
IUUC-Tre-122229	Trichoderma reesei	41.37	2.00e-123	437.00
IUUC-Tvi-122576	Trichoderma virens	41.60	2.00e-127	450.00
IUUC-Tme-127080	Tuber melanosporum	44.69	2.00e-153	536.00
IUUC-Ttr-128514	Tursiops truncatus	42.99	1.00e-95	344.00
IUUC-Uma-129556	Ustilago maydis	40.57	2.00e-128	454.00
IUUC-Vda-129715	Verticillium dahliae	41.44	2.00e-134	473.00
IUUC-Vvi-131211	Vitis vinifera	66.22	0.00e+00	836.00
IUUC-Yli-134438	Yarrowia lipolytica	40.37	1.00e-125	444.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence