iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__2921__AT4G14220.1	fgenesh2_kg.7__2921__AT4G14220.1	fgenesh2_kg.7__2921__AT4G14220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-07	30.9	40	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle+f  +d+  v++C+H +h++C+  w      s+++  CP+C
   Q: 40   CSICLEPFtlQDPSTVTSCKHEYHLQCIIEW------SQRSKECPIC 80
           ********99998999***************......********** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSNFTYTSAF NLSDSPFDSA IASSSSAFVV PSDDDSDDAC SICLEPFTLQ DPSTVTSCKH 60
EYHLQCIIEW SQRSKECPIC WQLFVLRDPA SQELLSAVEK ERLLKTRNIS SSSPISIHHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTTCTTCT TCTTCTTCAC CTTAAAATAT TTGGGTCTCG ATACCATTAA TGTGACATTG 60
CTTGGATTCT CTTCGTTTAT AAATAATACC AATTAGAGAG TTTGTGCAAA CATCGAATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016020--C:membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009561--P:megagametogenesis
GO:0055046--P:microgametogenesis
GO:0010498--P:proteasomal protein catabolic process
GO:0051726--P:regulation of cell cycle

KEGG

aly:ARALYDRAFT_493488

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002655	Amborella trichopoda	71.64	2.00e-27	115.00
IUUC-Ath-007279	Arabidopsis thaliana	91.37	4.00e-130	457.00
IUUC-Bol-015999	Brassica oleracea	63.84	2.00e-96	344.00
IUUC-Bra-017518	Brassica rapa	61.13	2.00e-82	298.00
IUUC-Gma-042977	Glycine max	49.13	1.00e-57	216.00
IUUC-Mtr-058591	Medicago truncatula	65.75	7.00e-26	110.00
IUUC-Ppa-095857	Physcomitrella patens	69.84	4.00e-25	108.00
IUUC-Pop-099767	Populus trichocarpa	47.06	4.00e-66	244.00
IUUC-Ppe-101316	Prunus persica	50.15	4.00e-60	224.00
IUUC-Smo-109592	Selaginella moellendorffii	71.64	5.00e-27	111.00
IUUC-Sit-110350	Setaria italica	65.67	4.00e-25	107.00
IUUC-Stu-112150	Solanum tuberosum	43.09	2.00e-48	185.00
IUUC-Sbi-113905	Sorghum bicolor	68.75	9.00e-26	110.00
IUUC-Tca-121560	Theobroma cacao	77.14	5.00e-31	128.00
IUUC-Tur-126169	Triticum urartu	32.53	1.00e-34	140.00
IUUC-Vvi-131270	Vitis vinifera	47.62	2.00e-61	228.00
IUUC-Yli-134652	Yarrowia lipolytica	44.44	6.00e-08	52.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence