iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s10240	POPTR_0010s10240.2	POPTR_0010s10240.2
POPTR_0010s10240	POPTR_0010s10240.1	POPTR_0010s10240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-06	29.2	45	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCl++f  +d+  v+ C+H +h++C+  w      s+++  CP+C
   Q: 45   CSICLDPFtaQDPATVTCCNHEYHLQCILEW------SQRSKECPIC 85
           ********9988788899*************......********** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MANFTSLTSP FSDTPMVSAA AAASSSSSSS SLGAGVDDAF EDDSCSICLD PFTAQDPATV 60
TCCNHEYHLQ CILEWSQRSK ECPICWQLLV LKDHASQELL AAVETERLLR SRNSTPASMI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA AGATTGTTTG ATTCCATCAA AAACTTAAAC CGTCTGAATC GGATTTCTTT 60
GCCTGCATTT TCTGCCTCCT CGCCTTTCCC TCTCCTTGAT CCTTTTCTTT TCCTTGACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s10240g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002655	Amborella trichopoda	38.32	4.00e-46	178.00
IUUC-Aly-005899	Arabidopsis lyrata	80.00	2.00e-29	122.00
IUUC-Ath-007279	Arabidopsis thaliana	67.83	4.00e-35	141.00
IUUC-Bol-015999	Brassica oleracea	76.92	1.00e-28	119.00
IUUC-Bra-017518	Brassica rapa	76.19	1.00e-26	112.00
IUUC-Gma-042977	Glycine max	46.37	1.00e-65	243.00
IUUC-Mtr-058591	Medicago truncatula	44.67	7.00e-27	114.00
IUUC-Ppa-095686	Physcomitrella patens	40.13	4.00e-39	154.00
IUUC-Ppe-101316	Prunus persica	56.84	3.00e-93	334.00
IUUC-Smo-109592	Selaginella moellendorffii	71.43	5.00e-29	118.00
IUUC-Sit-110350	Setaria italica	55.10	5.00e-26	111.00
IUUC-Stu-112150	Solanum tuberosum	53.19	1.00e-32	133.00
IUUC-Sbi-113905	Sorghum bicolor	39.24	1.00e-46	180.00
IUUC-Tca-121560	Theobroma cacao	51.89	6.00e-85	307.00
IUUC-Tur-126169	Triticum urartu	32.71	8.00e-36	143.00
IUUC-Vvi-131270	Vitis vinifera	57.73	2.00e-89	322.00
IUUC-Yli-134652	Yarrowia lipolytica	44.19	2.00e-07	50.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence