iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058681

Ensembl Protein ID

AES94614

UniProt Accession

G7K577; A0A0C3XC79; G7K577_MEDTR

Genbank Protein ID

AES94614.2

Protein Name

Transducin family protein/WD-40 repeat protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g016350

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g016350	KEH27517	KEH27517
MTR_5g016350	AES94614	AES94614

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-47	157.5	416	451
UBD/Beta-Prp	1.40e-65	222.8	226	401

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+c+++ ++  ll+s+sdD+t k+W++++++
   Q: 416  GHQSEVNCIKWdPTgSLLASCSDDNTAKIWSMKQDK 451
           8***********7779***************98876 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           v +l+gh+++v+++++sp+g++l+sGs d+t+r+w + +++   +                   ++ +d+ v+++ ++++g ll++G++D+  r+W   +g
   Q: 226  VTILEGHKSEVCACAWSPTGSFLASGSGDSTARIWTIAERTRKLDskndpstvlvlqhikgttNEKSKDKDVTTLDWNGEGTLLATGAYDGYARIWTT-NG 325
           56899**************************************999***************988888999**************************66.** PP
   S: 170  kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsir 247
           +l  tl++ h++++ sl+++++g ++++gs+d t ++wd+q+++  +++  h+ ++++v+   n+  ++s s D  i 
   Q: 326  ELKSTLSK-HKGAILSLKWNKKGDYILTGSCDETAIVWDVQAEKWKQQFAFHKGPTLDVDWR-NNVSFASSSTDTMIH 401
           ******99.**************************************************988.888889999998886 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASITSVELN YLVFRYLQES GFSHSAFVFG NEGGINKCPI DGNMVPPGAL VTFVQKGLQF 60
LEMEANLNNC DADFDEDFSF LQPLDLITKD VHELKKIINE RRRKLQKGKN KESEKEHDGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTGATGTA TGAACTATGA AGGCTAGACA GTGTCCTCTT CCGCGAATTA GATAGAACTT 60
GCCGCTTACT GCCTTTTTTT CGCACCAGTG TCTTCTGCCG CGTTGACACA AACAGTACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

mtr:MTR_5g016350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cne-026946	Cryptococcus neoformans	34.23	4.00e-29	122.00
IUUC-Sha-107326	Sarcophilus harrisii	48.03	4.00e-152	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence