iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121739

Ensembl Protein ID

EOX91578

UniProt Accession

A0A061DNN6; A0A061DNN6_THECC

Genbank Protein ID

EOX91578.1

Protein Name

WD-40 repeat family protein isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_000717

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000717	EOX91578	EOX91578
TCM_000717	EOX91579	EOX91579

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-44	148.1	525	563
UBD/Beta-Prp	1.50e-65	222.3	342	597

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+++af ++  +l+sGs D++++vW+l++g+ +k
   Q: 525  GHRDPVYSVAFsPNgEYLASGSLDKSMHVWSLKEGKIVK 563
           8***********777*******************99887 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncv 143
            l  +ls+h++++ ++k++++g++l+tgs D+t+ vwd+++ +  + ++ h+   l++++   + ++++ s d +i v ++ +   ++ t++gh+g vncv
   Q: 342  ELRTTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKAEEWKQQFEFHTGPTLDVDWRN-NVSFATSSTDHMIYVCKIGETRPIK-TFAGHQGEVNCV 440
           556789******************************************************99.8899*********************.************ PP
   S: 144  vvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.........kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnde 235
           +++p+g+ll+s+s+D t ++W++k++k +++l++ h + +y + ++++g           l+s+s d+tvklwd++ g+ +++lngh+d+v+sv+fspn+e
   Q: 441  KWDPTGSLLASCSDDITAKIWCMKQDKYVHDLRE-HSKEIYAIRWSPTGpgtnnpnqqLILASASFDSTVKLWDVELGKLLYSLNGHRDPVYSVAFSPNGE 540
           *********************************9.************99******9877889*************************************** PP
   S: 236  rlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwkl 294
           +l+sgs D+s  +W l+ g+++kt+++    +  v +++ ++ +++++ +++++ ++++
   Q: 541  YLASGSLDKSMHVWSLKEGKIVKTYTGN-GGIFEV-CWNKEGDKIAACFANNTLCVLDF 597
           *************************993.333333.34555555555555556655555 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTSITSVELN YLVFRYLQES GFTHSAFTLG YEAGINKCTI DGNLIPPGAL ITFVQKGLQY 60
LEMEANLSNN DVEMDEDFSF LQPLDIITKD VNQLRQMIKE KRKSVQKDRE KEKDKDKEFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTACAGCCCA AATTTACTGA AACTGGCTAG TTAAACTGGG CCTGTCTTAT GCAAAATCAT 60
TCAGCCCAAA TCCTTTCAGG CCTAAACAGA TATACTGTGA CCATCCAGAT GCGAGGTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	77.46	4.00e-69	252.00
IUUC-Aml-001717	Ailuropoda melanoleuca	56.87	5.00e-117	413.00
IUUC-Atr-002514	Amborella trichopoda	75.33	2.00e-172	597.00
IUUC-Apl-003708	Anas platyrhynchos	56.87	7.00e-117	413.00
IUUC-Aca-004611	Anolis carolinensis	56.59	1.00e-116	412.00
IUUC-Aly-005622	Arabidopsis lyrata	75.06	6.00e-173	599.00
IUUC-Ath-007137	Arabidopsis thaliana	75.56	4.00e-172	597.00
IUUC-Ame-011601	Astyanax mexicanus	56.95	2.00e-118	418.00
IUUC-Bta-013202	Bos taurus	54.55	2.00e-125	441.00
IUUC-Bdi-014315	Brachypodium distachyon	71.83	9.00e-164	569.00
IUUC-Bol-016277	Brassica oleracea	74.07	1.00e-176	612.00
IUUC-Bra-016944	Brassica rapa	73.61	2.00e-177	614.00
IUUC-Cja-018832	Callithrix jacchus	56.87	5.00e-117	414.00
IUUC-Cfa-020029	Canis familiaris	56.87	5.00e-117	414.00
IUUC-Cpo-021682	Cavia porcellus	54.29	8.00e-125	439.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	56.10	6.00e-116	410.00
IUUC-Csa-024075	Chlorocebus sabaeus	56.87	5.00e-117	414.00
IUUC-Cin-025704	Ciona intestinalis	55.68	2.00e-122	431.00
IUUC-Csv-026257	Ciona savignyi	52.64	5.00e-121	427.00
IUUC-Cne-026946	Cryptococcus neoformans	29.20	2.00e-20	93.60
IUUC-Cme-027258	Cyanidioschyzon merolae	39.44	2.00e-83	302.00
IUUC-Dre-027906	Danio rerio	56.68	1.00e-117	415.00
IUUC-Dno-029196	Dasypus novemcinctus	56.87	3.00e-117	414.00
IUUC-Dor-030732	Dipodomys ordii	56.42	6.00e-113	400.00
IUUC-Dme-031939	Drosophila melanogaster	54.21	8.00e-112	397.00
IUUC-Ete-033150	Echinops telfairi	55.59	5.00e-102	363.00
IUUC-Eca-033897	Equus caballus	54.04	2.00e-124	438.00
IUUC-Eeu-034952	Erinaceus europaeus	61.24	2.00e-93	335.00
IUUC-Fca-035734	Felis catus	56.87	4.00e-117	414.00
IUUC-Fal-037185	Ficedula albicollis	56.87	4.00e-117	414.00
IUUC-Gmo-038870	Gadus morhua	56.32	4.00e-123	434.00
IUUC-Gga-041161	Gallus gallus	56.87	3.00e-117	414.00
IUUC-Gac-041844	Gasterosteus aculeatus	57.14	1.00e-125	442.00
IUUC-Gma-043369	Glycine max	82.92	0.00e+00	703.00
IUUC-Ggo-044882	Gorilla gorilla	56.87	5.00e-117	414.00
IUUC-Hsa-046488	Homo sapiens	56.87	5.00e-117	414.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	56.87	3.00e-116	410.00
IUUC-Lch-050672	Latimeria chalumnae	54.12	1.00e-116	412.00
IUUC-Lpe-051084	Leersia perrieri	72.29	2.00e-165	574.00
IUUC-Loc-052030	Lepisosteus oculatus	57.14	9.00e-126	442.00
IUUC-Laf-054280	Loxodonta africana	56.59	8.00e-125	439.00
IUUC-Mcc-055203	Macaca mulatta	56.87	5.00e-117	414.00
IUUC-Meu-056563	Macropus eugenii	63.76	3.00e-79	288.00
IUUC-Mtr-058624	Medicago truncatula	69.67	0.00e+00	793.00
IUUC-Mga-059660	Meleagris gallopavo	56.87	3.00e-117	414.00
IUUC-Mvi-060557	Microbotryum violaceum	33.68	1.00e-62	234.00
IUUC-Mmr-060925	Microcebus murinus	56.87	2.00e-116	412.00
IUUC-Mdo-062078	Monodelphis domestica	56.59	1.00e-116	412.00
IUUC-Mmu-063603	Mus musculus	56.87	2.00e-117	414.00
IUUC-Mac-065508	Musa acuminata	69.57	5.00e-113	400.00
IUUC-Mpu-066741	Mustela putorius furo	56.87	5.00e-117	414.00
IUUC-Mlu-068152	Myotis lucifugus	56.87	4.00e-117	414.00
IUUC-Nle-069229	Nomascus leucogenys	56.87	5.00e-117	414.00
IUUC-Opr-070277	Ochotona princeps	50.28	2.00e-94	338.00
IUUC-Ont-071569	Oreochromis niloticus	57.42	2.00e-126	444.00
IUUC-Oan-073562	Ornithorhynchus anatinus	54.57	4.00e-125	440.00
IUUC-Ocu-074280	Oryctolagus cuniculus	56.87	3.00e-117	414.00
IUUC-Oba-075618	Oryza barthii	58.72	0.00e+00	652.00
IUUC-Obr-076718	Oryza brachyantha	73.49	3.00e-164	570.00
IUUC-Ogl-077302	Oryza glaberrima	60.69	0.00e+00	691.00
IUUC-Ogu-078718	Oryza glumaepatula	59.06	0.00e+00	697.00
IUUC-Oin-079515	Oryza indica	79.02	7.00e-70	258.00
IUUC-Olo-080427	Oryza longistaminata	62.50	3.00e-27	115.00
IUUC-Ome-081696	Oryza meridionalis	58.41	0.00e+00	682.00
IUUC-Oni-082137	Oryza nivara	59.06	0.00e+00	697.00
IUUC-Opu-083505	Oryza punctata	60.00	0.00e+00	655.00
IUUC-Oru-085276	Oryza rufipogon	59.06	0.00e+00	697.00
IUUC-Osa-085791	Oryza sativa	59.06	0.00e+00	697.00
IUUC-Ola-087365	Oryzias latipes	56.59	2.00e-124	438.00
IUUC-Olu-087589	Ostreococcus lucimarinus	58.62	4.00e-132	464.00
IUUC-Oga-088357	Otolemur garnettii	54.95	6.00e-108	383.00
IUUC-Oar-089214	Ovis aries	56.59	6.00e-125	440.00
IUUC-Ptr-091532	Pan troglodytes	56.87	5.00e-117	414.00
IUUC-Pan-091927	Papio anubis	56.87	5.00e-117	414.00
IUUC-Psi-093358	Pelodiscus sinensis	53.73	2.00e-125	441.00
IUUC-Ppa-095868	Physcomitrella patens	67.53	1.00e-149	522.00
IUUC-Pfo-096158	Poecilia formosa	56.59	3.00e-125	441.00
IUUC-Pab-098705	Pongo abelii	56.87	5.00e-117	414.00
IUUC-Pop-098989	Populus trichocarpa	83.99	0.00e+00	648.00
IUUC-Pca-100256	Procavia capensis	56.11	1.00e-113	402.00
IUUC-Ppe-101572	Prunus persica	74.04	2.00e-165	574.00
IUUC-Pva-102616	Pteropus vampyrus	56.42	1.00e-113	402.00
IUUC-Rno-105411	Rattus norvegicus	56.87	5.00e-117	413.00
IUUC-Sha-106636	Sarcophilus harrisii	56.59	2.00e-116	412.00
IUUC-Smo-109301	Selaginella moellendorffii	69.34	5.00e-152	530.00
IUUC-Sit-110710	Setaria italica	72.29	1.00e-170	592.00
IUUC-Sly-111336	Solanum lycopersicum	71.22	2.00e-169	588.00
IUUC-Stu-112786	Solanum tuberosum	62.00	8.00e-144	503.00
IUUC-Sar-112971	Sorex araneus	48.48	2.00e-102	365.00
IUUC-Sbi-114420	Sorghum bicolor	72.54	8.00e-173	599.00
IUUC-Sre-115175	Sporisorium reilianum	37.94	2.00e-45	176.00
IUUC-Ssc-115695	Sus scrofa	56.87	5.00e-117	414.00
IUUC-Tgu-116898	Taeniopygia guttata	54.04	1.00e-124	439.00
IUUC-Tru-118254	Takifugu rubripes	57.14	1.00e-125	442.00
IUUC-Tsy-118853	Tarsius syrichta	48.92	6.00e-86	310.00
IUUC-Tni-119986	Tetraodon nigroviridis	57.14	3.00e-125	441.00
IUUC-Tae-125368	Triticum aestivum	72.04	1.00e-165	575.00
IUUC-Tur-126856	Triticum urartu	66.81	1.00e-77	283.00
IUUC-Tme-127126	Tuber melanosporum	32.83	3.00e-41	161.00
IUUC-Tbe-127767	Tupaia belangeri	57.53	3.00e-103	367.00
IUUC-Ttr-128826	Tursiops truncatus	54.11	3.00e-108	384.00
IUUC-Uma-129469	Ustilago maydis	37.12	1.00e-45	177.00
IUUC-Vpa-130768	Vicugna pacos	56.11	8.00e-114	403.00
IUUC-Vvi-131193	Vitis vinifera	81.75	0.00e+00	676.00
IUUC-Xtr-132842	Xenopus tropicalis	54.27	1.00e-109	389.00
IUUC-Xma-134020	Xiphophorus maculatus	56.59	3.00e-125	441.00
IUUC-Yli-134648	Yarrowia lipolytica	25.85	5.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence