iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118343

Ensembl Protein ID

ENSTRUP00000027777.1

UniProt Accession

H2TSW9; H2TSW9_TAKRU

Protein Name

Uncharacterized protein

Gene Name

zgc:86896; LOC101079431

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000011004.1	ENSTRUT00000027887.1	ENSTRUP00000027777.1
ENSTRUG00000011004.1	ENSTRUT00000027888.1	ENSTRUP00000027778.1
ENSTRUG00000011004.1	ENSTRUT00000027889.1	ENSTRUP00000027779.1
ENSTRUG00000011004.1	ENSTRUT00000027890.1	ENSTRUP00000027780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-10	42.6	83	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H++++t++++ ++ +++vs++ D + +vW l++g
   Q: 83   HSGRITGIDWaPEsNRIVSCASDRNAYVWTLKDG 116
           9**********888***************99887 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

SYCTAPFVLT VQSPRIQPCC TTTPTQLTLE IDMSLHSFGL EPLSCHAWNK DRTQIAVSPN 60
NNVVIIYEKK GKDWTKIHEL AEHSGRITGI DWAPESNRIV SCASDRNAYV WTLKDGAWKP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGTACTGCA CAGCTCCATT CGTGTTGACT GTCCAGAGTC CACGGATACA GCCCTGCTGC 60
ACCACTACAC CCACACAATT AACGTAAGTA ATGGCTTCCA CCCTCAATGC TTCAATTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010874	Astyanax mexicanus	82.58	2.00e-180	624.00
IUUC-Dre-027781	Danio rerio	80.95	4.00e-179	620.00
IUUC-Gmo-038608	Gadus morhua	80.62	3.00e-178	617.00
IUUC-Gac-042536	Gasterosteus aculeatus	81.35	0.00e+00	659.00
IUUC-Loc-051844	Lepisosteus oculatus	77.16	4.00e-170	590.00
IUUC-Ont-072444	Oreochromis niloticus	85.35	0.00e+00	657.00
IUUC-Ola-086754	Oryzias latipes	78.55	0.00e+00	640.00
IUUC-Pfo-097144	Poecilia formosa	87.04	1.00e-178	619.00
IUUC-Sce-106411	Saccharomyces cerevisiae	36.78	1.00e-62	233.00
IUUC-Xtr-131770	Xenopus tropicalis	65.64	5.00e-151	526.00
IUUC-Xma-134294	Xiphophorus maculatus	85.63	3.00e-176	610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence