iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tvi-122451

Ensembl Protein ID

EHK27410

UniProt Accession

G9MEB8; G9MEB8_HYPVG

Genbank Protein ID

EHK27410.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABDF02000001

Gene Name

TRIVIDRAFT_197255

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIVIDRAFT_197255	EHK27410	EHK27410

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-28	96.8	474	504
UBD/Beta-Prp	2.50e-68	229.8	261	454

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+++v++laf ++ + lvsGs+D t ++W+
   Q: 474  GHEGPVSALAFtPNgNSLVSGSWDRTARIWS 504
           8***********777***************8 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG.shdrtirvwdletgqcleetlsghdgvvncvvvhpdg 149
           + +a v++  f+ ++++lv g + ++  ++++ ++  +h+l+  +++v  +++++sg++l+ G s+   + vw++++++ +   ++gh +++n+vv++pdg
   Q: 261  QGSAHVRCAFFHAQTNLLVAGLSNGLFSLYEMPDFNNIHKLSISQSDVDFVTINQSGEWLAFGaSKLGQLLVWEWQSESYIL-KQQGHFDSINSVVYSPDG 360
           5677788888888888888888888888888888888888888888888888888888888764677788888888888888.788888888888888888 PP
   S: 150  nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssD 243
           + +++ ++D+++++Wd+++g+++ t+t+ ht+ v+  +f ++g+ l + sldg+v+ wdl + +  rt+++ t   ++s++++p +e ++ gs D
   Q: 361  QRIITTADDGKIKVWDIESGFCIVTFTE-HTSGVTACEFAKKGNVLFTSSLDGSVRAWDLIRYRNFRTFTAPTrLSFTSMAVDPSGEVVAAGSLD 454
           8888888888888888888888888887.888888888888888888888888888888888888888888552567888888888888888766 PP

Organism

Trichoderma virens

Protein Sequence
(Fasta)

MKTDFRFSNL LGTVYCQGNL VFSPDGTHLF SPVGNRVTVF NLVDNKSHTL PFAHRKNIVR 60
IGLSPRGNLL LTVDEDGHAI LTNVPRRVSI YHFSFRTQVT ALSFSPSGRY FVVGLGRKVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGACCG ATTTTAGGGT ATGGCGAGGA CTTGATTTCG ACTGCTCACA CCATCCTATC 60
ACCGTTCAAT TGCCCATCAC ACACAATTCA CATCTGCTAT CCCCAGAGTG ATACAGGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000920--P:cell separation after cytokinesis
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030010--P:establishment of cell polarity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	43.78	0.00e+00	750.00
IUUC-Atr-003033	Amborella trichopoda	42.93	1.00e-155	542.00
IUUC-Apl-003219	Anas platyrhynchos	43.08	0.00e+00	738.00
IUUC-Aca-004950	Anolis carolinensis	43.36	0.00e+00	756.00
IUUC-Aly-006213	Arabidopsis lyrata	45.17	3.00e-151	527.00
IUUC-Ath-006593	Arabidopsis thaliana	44.35	3.00e-149	521.00
IUUC-Ago-007916	Ashbya gossypii	53.60	0.00e+00	934.00
IUUC-Acl-008225	Aspergillus clavatus	67.05	0.00e+00	1217.00
IUUC-Afl-008390	Aspergillus flavus	66.24	0.00e+00	1194.00
IUUC-Afu-009039	Aspergillus fumigatus	65.89	0.00e+00	1186.00
IUUC-Ani-009228	Aspergillus nidulans	62.10	0.00e+00	1060.00
IUUC-Ang-009663	Aspergillus niger	66.59	0.00e+00	1177.00
IUUC-Aor-009923	Aspergillus oryzae	66.24	0.00e+00	1194.00
IUUC-Ate-010264	Aspergillus terreus	67.51	0.00e+00	1217.00
IUUC-Ame-010790	Astyanax mexicanus	43.50	7.00e-50	189.00
IUUC-Bgr-012066	Blumeria graminis	71.03	0.00e+00	1315.00
IUUC-Bta-012399	Bos taurus	43.37	0.00e+00	718.00
IUUC-Bci-013757	Botrytis cinerea	76.51	0.00e+00	1355.00
IUUC-Bdi-015028	Brachypodium distachyon	41.33	0.00e+00	667.00
IUUC-Bol-016521	Brassica oleracea	41.39	0.00e+00	662.00
IUUC-Bra-017096	Brassica rapa	40.94	0.00e+00	666.00
IUUC-Cel-018690	Caenorhabditis elegans	34.36	2.00e-146	511.00
IUUC-Cja-019229	Callithrix jacchus	42.67	0.00e+00	733.00
IUUC-Cfa-020504	Canis familiaris	48.40	2.00e-170	591.00
IUUC-Cpo-021574	Cavia porcellus	48.08	2.00e-171	594.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	42.43	1.00e-148	519.00
IUUC-Csa-023436	Chlorocebus sabaeus	42.68	0.00e+00	726.00
IUUC-Cin-025397	Ciona intestinalis	41.69	3.00e-160	557.00
IUUC-Csv-026194	Ciona savignyi	47.26	5.00e-138	483.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	82.71	0.00e+00	1456.00
IUUC-Cne-027031	Cryptococcus neoformans	49.26	0.00e+00	910.00
IUUC-Cme-027276	Cyanidioschyzon merolae	33.56	1.00e-75	276.00
IUUC-Dre-027514	Danio rerio	46.22	7.00e-165	572.00
IUUC-Dno-029191	Dasypus novemcinctus	45.59	7.00e-166	575.00
IUUC-Dor-030149	Dipodomys ordii	43.08	0.00e+00	750.00
IUUC-Dse-031260	Dothistroma septosporum	69.54	0.00e+00	802.00
IUUC-Dme-032043	Drosophila melanogaster	42.79	5.00e-143	500.00
IUUC-Ete-033102	Echinops telfairi	50.46	8.00e-153	532.00
IUUC-Eca-033223	Equus caballus	38.02	3.00e-171	593.00
IUUC-Fca-035795	Felis catus	41.09	0.00e+00	679.00
IUUC-Fal-036830	Ficedula albicollis	42.03	0.00e+00	734.00
IUUC-Fox-037835	Fusarium oxysporum	84.70	0.00e+00	1497.00
IUUC-Fso-038324	Fusarium solani	85.00	0.00e+00	1501.00
IUUC-Gmo-039355	Gadus morhua	46.39	5.00e-168	583.00
IUUC-Ggr-039840	Gaeumannomyces graminis	79.23	0.00e+00	1342.00
IUUC-Gga-040907	Gallus gallus	47.67	4.00e-152	530.00
IUUC-Gac-042624	Gasterosteus aculeatus	46.19	4.00e-162	563.00
IUUC-Gma-043034	Glycine max	38.08	6.00e-175	606.00
IUUC-Hsa-046145	Homo sapiens	42.71	0.00e+00	748.00
IUUC-Hvu-047416	Hordeum vulgare	40.70	0.00e+00	675.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	48.01	7.00e-170	589.00
IUUC-Kpa-049150	Komagataella pastoris	52.27	0.00e+00	912.00
IUUC-Lch-049460	Latimeria chalumnae	41.16	1.00e-177	615.00
IUUC-Lpe-050840	Leersia perrieri	44.63	3.00e-158	551.00
IUUC-Loc-052733	Lepisosteus oculatus	43.71	0.00e+00	737.00
IUUC-Lma-053277	Leptosphaeria maculans	68.69	0.00e+00	1240.00
IUUC-Laf-054294	Loxodonta africana	43.35	0.00e+00	726.00
IUUC-Mcc-054624	Macaca mulatta	42.91	0.00e+00	749.00
IUUC-Meu-056665	Macropus eugenii	42.46	8.00e-92	329.00
IUUC-Mor-057288	Magnaporthe oryzae	80.02	0.00e+00	1404.00
IUUC-Mpo-057594	Magnaporthe poae	78.34	0.00e+00	1349.00
IUUC-Mtr-058700	Medicago truncatula	40.72	0.00e+00	699.00
IUUC-Mla-058846	Melampsora laricipopulina	50.06	0.00e+00	859.00
IUUC-Mga-059207	Meleagris gallopavo	37.50	8.00e-178	615.00
IUUC-Mvi-060327	Microbotryum violaceum	50.06	0.00e+00	904.00
IUUC-Mmr-061264	Microcebus murinus	47.90	1.00e-163	568.00
IUUC-Mdo-062327	Monodelphis domestica	43.69	0.00e+00	755.00
IUUC-Mmu-063542	Mus musculus	47.90	3.00e-162	563.00
IUUC-Mac-065142	Musa acuminata	41.49	0.00e+00	674.00
IUUC-Mpu-066098	Mustela putorius furo	42.12	2.00e-179	621.00
IUUC-Mlu-067056	Myotis lucifugus	38.52	2.00e-179	620.00
IUUC-Nfi-068323	Neosartorya fischeri	65.90	0.00e+00	1193.00
IUUC-Ncr-068925	Neurospora crassa	81.93	0.00e+00	1472.00
IUUC-Nle-068970	Nomascus leucogenys	42.56	0.00e+00	742.00
IUUC-Opr-070966	Ochotona princeps	54.19	2.00e-102	364.00
IUUC-Ont-071252	Oreochromis niloticus	41.69	0.00e+00	715.00
IUUC-Oan-072737	Ornithorhynchus anatinus	47.83	5.00e-165	573.00
IUUC-Oba-075794	Oryza barthii	39.64	0.00e+00	641.00
IUUC-Obr-076617	Oryza brachyantha	40.85	0.00e+00	676.00
IUUC-Ogl-077022	Oryza glaberrima	40.90	0.00e+00	678.00
IUUC-Ogu-078757	Oryza glumaepatula	34.48	9.00e-89	320.00
IUUC-Oin-079813	Oryza indica	40.90	0.00e+00	673.00
IUUC-Olo-080265	Oryza longistaminata	40.79	0.00e+00	677.00
IUUC-Ome-081494	Oryza meridionalis	40.56	0.00e+00	670.00
IUUC-Oni-082639	Oryza nivara	34.29	9.00e-88	316.00
IUUC-Opu-084005	Oryza punctata	41.01	0.00e+00	681.00
IUUC-Oru-084883	Oryza rufipogon	34.48	1.00e-88	319.00
IUUC-Osa-086158	Oryza sativa	40.67	0.00e+00	674.00
IUUC-Ola-086822	Oryzias latipes	42.57	0.00e+00	729.00
IUUC-Oga-088887	Otolemur garnettii	48.24	4.00e-164	570.00
IUUC-Oar-090110	Ovis aries	48.07	1.00e-160	559.00
IUUC-Pan-092808	Papio anubis	42.92	0.00e+00	749.00
IUUC-Psi-093954	Pelodiscus sinensis	43.19	0.00e+00	750.00
IUUC-Pno-094922	Phaeosphaeria nodorum	69.24	0.00e+00	1274.00
IUUC-Ppa-095678	Physcomitrella patens	42.53	0.00e+00	655.00
IUUC-Pfo-097175	Poecilia formosa	43.06	0.00e+00	745.00
IUUC-Pab-098155	Pongo abelii	42.97	0.00e+00	750.00
IUUC-Pop-099635	Populus trichocarpa	43.32	2.00e-157	548.00
IUUC-Pca-100947	Procavia capensis	44.03	4.00e-150	523.00
IUUC-Ppe-101552	Prunus persica	46.82	1.00e-166	578.00
IUUC-Pva-102744	Pteropus vampyrus	40.63	0.00e+00	627.00
IUUC-Pgr-103389	Puccinia graminis	48.89	0.00e+00	845.00
IUUC-Ptt-103953	Puccinia triticina	41.78	0.00e+00	653.00
IUUC-Pte-104079	Pyrenophora teres	70.21	0.00e+00	1248.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	70.21	0.00e+00	1248.00
IUUC-Rno-105502	Rattus norvegicus	47.45	2.00e-170	591.00
IUUC-Sce-106390	Saccharomyces cerevisiae	54.28	0.00e+00	976.00
IUUC-Sha-107264	Sarcophilus harrisii	42.07	4.00e-90	323.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	55.33	0.00e+00	1006.00
IUUC-Spo-108348	Schizosaccharomyces pombe	53.64	0.00e+00	947.00
IUUC-Smo-109327	Selaginella moellendorffii	40.98	0.00e+00	667.00
IUUC-Sit-110304	Setaria italica	41.42	0.00e+00	703.00
IUUC-Sly-111620	Solanum lycopersicum	45.25	1.00e-151	528.00
IUUC-Stu-112877	Solanum tuberosum	40.75	0.00e+00	709.00
IUUC-Sbi-114702	Sorghum bicolor	41.99	0.00e+00	692.00
IUUC-Sre-115129	Sporisorium reilianum	46.83	0.00e+00	793.00
IUUC-Ssc-115931	Sus scrofa	40.10	4.00e-87	313.00
IUUC-Tgu-116787	Taeniopygia guttata	42.38	0.00e+00	739.00
IUUC-Tru-118218	Takifugu rubripes	42.08	0.00e+00	723.00
IUUC-Tsy-119401	Tarsius syrichta	44.21	3.00e-117	414.00
IUUC-Tni-120046	Tetraodon nigroviridis	42.65	0.00e+00	695.00
IUUC-Tca-121685	Theobroma cacao	45.95	1.00e-163	568.00
IUUC-Tre-122154	Trichoderma reesei	95.57	0.00e+00	1667.00
IUUC-Tae-125397	Triticum aestivum	42.21	2.00e-113	402.00
IUUC-Tur-126650	Triticum urartu	41.14	0.00e+00	625.00
IUUC-Tme-127005	Tuber melanosporum	63.81	0.00e+00	1121.00
IUUC-Tbe-128102	Tupaia belangeri	55.77	3.00e-104	371.00
IUUC-Ttr-128259	Tursiops truncatus	44.28	0.00e+00	727.00
IUUC-Uma-129511	Ustilago maydis	47.68	0.00e+00	774.00
IUUC-Vda-129833	Verticillium dahliae	77.71	0.00e+00	1337.00
IUUC-Vvi-131572	Vitis vinifera	41.10	0.00e+00	651.00
IUUC-Xtr-131776	Xenopus tropicalis	32.99	6.00e-53	200.00
IUUC-Xma-133887	Xiphophorus maculatus	42.81	0.00e+00	711.00
IUUC-Yli-134427	Yarrowia lipolytica	55.24	0.00e+00	986.00
IUUC-Zma-135980	Zea mays	42.12	0.00e+00	682.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence