iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132728

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

CCR4-NOT transcription complex subunit 4; CCR4-NOT transcription complex, subunit 4

Genbank Nucleotide ID

AAMC01119021

Gene Name

cnot4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000010594.3	ENSXETT00000023233.3	ENSXETP00000023233.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	44.90	4.00e-55	211.00	IUUC-Sce-106312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSRSPVVKED PVECPLCMEP LEIDDINFFP CTCGYQICRF CWHRIRTDEN GLCPACRKPY 60
PEDPAVYKPL SQEELQRIKN EKKQKQNERK QKISENRKHL ASVRVVQKNL VFVVGLSQRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGAGGAG GAGTTCCCCG GCCGCCATTA CTCTCCCAGG CGCACACGGA GCTGAAGAGC 60
CGGCGCAGGA GGCGGTGCAA GCCGGGTAAG TGCAACGGTT GGGCCTTACT GCGGGCCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0694--RNA-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR034261--CNOT4_RRM
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50102--RRM
PS50103--ZF_C3H1
PS50089--ZF_RING_2

Pfam

PF00076--RRM_1

SMART

SM00361--RRM_1

Gene Ontology

GO:0030014--C:CCR4-NOT complex
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

xtr:594959

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000464	Aegilops tauschii	42.48	3.00e-54	207.00
IUUC-Aml-002384	Ailuropoda melanoleuca	98.18	6.00e-152	531.00
IUUC-Atr-002462	Amborella trichopoda	46.64	6.00e-61	229.00
IUUC-Apl-003756	Anas platyrhynchos	85.25	0.00e+00	1050.00
IUUC-Aca-004643	Anolis carolinensis	77.41	0.00e+00	1105.00
IUUC-Aly-006093	Arabidopsis lyrata	39.76	4.00e-55	209.00
IUUC-Ath-007371	Arabidopsis thaliana	41.73	1.00e-54	208.00
IUUC-Ago-007799	Ashbya gossypii	49.34	2.00e-56	213.00
IUUC-Acl-008077	Aspergillus clavatus	38.72	5.00e-42	167.00
IUUC-Afl-008720	Aspergillus flavus	39.57	1.00e-46	182.00
IUUC-Afu-008905	Aspergillus fumigatus	39.47	3.00e-43	171.00
IUUC-Ani-009264	Aspergillus nidulans	40.44	3.00e-27	117.00
IUUC-Ang-009537	Aspergillus niger	39.57	6.00e-46	180.00
IUUC-Aor-010123	Aspergillus oryzae	35.68	3.00e-28	121.00
IUUC-Ate-010409	Aspergillus terreus	40.43	2.00e-46	182.00
IUUC-Ame-011538	Astyanax mexicanus	68.33	0.00e+00	713.00
IUUC-Bgr-012062	Blumeria graminis	42.86	4.00e-55	210.00
IUUC-Bta-012419	Bos taurus	98.18	9.00e-153	533.00
IUUC-Bci-013633	Botrytis cinerea	42.62	2.00e-54	207.00
IUUC-Bdi-014913	Brachypodium distachyon	43.81	2.00e-54	208.00
IUUC-Bol-016407	Brassica oleracea	44.80	2.00e-57	217.00
IUUC-Bra-017755	Brassica rapa	45.25	9.00e-58	218.00
IUUC-Cel-018123	Caenorhabditis elegans	59.66	4.00e-85	309.00
IUUC-Cja-019705	Callithrix jacchus	98.52	3.00e-150	525.00
IUUC-Cfa-020440	Canis familiaris	98.52	4.00e-150	525.00
IUUC-Cpo-022091	Cavia porcellus	91.85	2.00e-148	519.00
IUUC-Cre-022872	Chlamydomonas reinhardtii	40.26	3.00e-12	66.20
IUUC-Csa-024202	Chlorocebus sabaeus	98.52	8.00e-150	523.00
IUUC-Cho-024410	Choloepus hoffmanni	99.47	5.00e-99	355.00
IUUC-Cin-025558	Ciona intestinalis	73.08	4.00e-112	398.00
IUUC-Cgl-026687	Colletotrichum gloeosporioides	45.30	5.00e-56	212.00
IUUC-Cne-027084	Cryptococcus neoformans	37.80	1.00e-44	174.00
IUUC-Cme-027148	Cyanidioschyzon merolae	29.95	4.00e-22	99.80
IUUC-Dre-028377	Danio rerio	69.57	0.00e+00	721.00
IUUC-Dno-029100	Dasypus novemcinctus	98.55	1.00e-153	536.00
IUUC-Dor-030310	Dipodomys ordii	97.38	4.00e-119	422.00
IUUC-Dse-031514	Dothistroma septosporum	42.11	9.00e-49	188.00
IUUC-Dme-031735	Drosophila melanogaster	74.07	8.00e-107	381.00
IUUC-Ete-033091	Echinops telfairi	93.45	7.00e-142	497.00
IUUC-Eca-033506	Equus caballus	98.18	1.00e-152	533.00
IUUC-Eeu-034506	Erinaceus europaeus	86.14	4.00e-129	455.00
IUUC-Fca-036033	Felis catus	98.52	3.00e-150	525.00
IUUC-Fal-037540	Ficedula albicollis	85.56	0.00e+00	1064.00
IUUC-Fox-037944	Fusarium oxysporum	44.92	2.00e-58	220.00
IUUC-Fso-038172	Fusarium solani	42.37	1.00e-47	186.00
IUUC-Gmo-039211	Gadus morhua	63.14	0.00e+00	661.00
IUUC-Ggr-040096	Gaeumannomyces graminis	47.03	2.00e-61	231.00
IUUC-Gga-040487	Gallus gallus	84.94	0.00e+00	1058.00
IUUC-Gac-042294	Gasterosteus aculeatus	68.29	0.00e+00	730.00
IUUC-Gma-043229	Glycine max	45.11	4.00e-56	213.00
IUUC-Ggo-044950	Gorilla gorilla	82.71	2.00e-121	429.00
IUUC-Hsa-046666	Homo sapiens	98.18	1.00e-152	533.00
IUUC-Hvu-047405	Hordeum vulgare	42.92	3.00e-54	207.00
IUUC-Itr-047888	Ictidomys tridecemlineatus	98.52	3.00e-149	520.00
IUUC-Kpa-049260	Komagataella pastoris	47.37	2.00e-54	207.00
IUUC-Lch-050203	Latimeria chalumnae	87.01	0.00e+00	1033.00
IUUC-Lpe-051195	Leersia perrieri	43.67	2.00e-53	204.00
IUUC-Loc-052886	Lepisosteus oculatus	79.57	0.00e+00	916.00
IUUC-Lma-053073	Leptosphaeria maculans	43.67	3.00e-52	200.00
IUUC-Laf-053490	Loxodonta africana	96.10	1.00e-153	536.00
IUUC-Mcc-055724	Macaca mulatta	98.18	9.00e-153	533.00
IUUC-Meu-056787	Macropus eugenii	82.56	8.00e-115	407.00
IUUC-Mor-056921	Magnaporthe oryzae	46.61	9.00e-60	224.00
IUUC-Mpo-057616	Magnaporthe poae	46.61	2.00e-60	227.00
IUUC-Mtr-058426	Medicago truncatula	43.35	6.00e-53	202.00
IUUC-Mla-059146	Melampsora laricipopulina	42.24	8.00e-46	179.00
IUUC-Mga-059372	Meleagris gallopavo	85.25	0.00e+00	1053.00
IUUC-Mvi-060479	Microbotryum violaceum	36.07	6.00e-31	129.00
IUUC-Mmr-061012	Microcebus murinus	98.18	6.00e-153	534.00
IUUC-Mdo-062330	Monodelphis domestica	98.52	5.00e-150	524.00
IUUC-Mmu-063894	Mus musculus	98.52	5.00e-150	524.00
IUUC-Mac-064805	Musa acuminata	45.33	9.00e-58	217.00
IUUC-Mpu-066894	Mustela putorius furo	98.52	4.00e-150	525.00
IUUC-Mlu-067321	Myotis lucifugus	98.18	1.00e-152	533.00
IUUC-Nfi-068451	Neosartorya fischeri	39.15	3.00e-43	171.00
IUUC-Ncr-068667	Neurospora crassa	44.92	4.00e-53	204.00
IUUC-Nle-070058	Nomascus leucogenys	98.18	4.00e-143	501.00
IUUC-Opr-071108	Ochotona princeps	82.31	1.00e-117	417.00
IUUC-Ont-071541	Oreochromis niloticus	69.05	0.00e+00	736.00
IUUC-Oan-073232	Ornithorhynchus anatinus	98.89	1.00e-150	526.00
IUUC-Ocu-074893	Oryctolagus cuniculus	98.52	5.00e-150	524.00
IUUC-Oba-075623	Oryza barthii	39.38	3.00e-28	119.00
IUUC-Obr-076653	Oryza brachyantha	43.36	2.00e-55	211.00
IUUC-Ogl-077946	Oryza glaberrima	43.07	8.00e-45	172.00
IUUC-Ogu-078775	Oryza glumaepatula	44.05	3.00e-53	201.00
IUUC-Oin-079214	Oryza indica	44.05	2.00e-55	211.00
IUUC-Olo-080799	Oryza longistaminata	32.74	2.00e-29	122.00
IUUC-Ome-081843	Oryza meridionalis	40.83	2.00e-52	200.00
IUUC-Oni-082944	Oryza nivara	39.38	1.00e-29	122.00
IUUC-Opu-083668	Oryza punctata	43.61	3.00e-55	210.00
IUUC-Oru-084249	Oryza rufipogon	34.88	3.00e-35	143.00
IUUC-Osa-086233	Oryza sativa	44.05	1.00e-55	211.00
IUUC-Ola-087121	Oryzias latipes	68.65	0.00e+00	714.00
IUUC-Olu-087772	Ostreococcus lucimarinus	42.11	5.00e-41	160.00
IUUC-Oga-088556	Otolemur garnettii	98.18	6.00e-153	534.00
IUUC-Oar-089768	Ovis aries	98.18	6.00e-153	534.00
IUUC-Ptr-090585	Pan troglodytes	98.18	8.00e-153	533.00
IUUC-Pan-092625	Papio anubis	98.52	8.00e-150	523.00
IUUC-Psi-093462	Pelodiscus sinensis	83.72	0.00e+00	978.00
IUUC-Pma-094468	Petromyzon marinus	79.17	2.00e-127	449.00
IUUC-Pno-094812	Phaeosphaeria nodorum	40.45	3.00e-29	124.00
IUUC-Ppa-095589	Physcomitrella patens	51.79	7.00e-15	75.10
IUUC-Pfo-096762	Poecilia formosa	68.23	0.00e+00	706.00
IUUC-Pab-097890	Pongo abelii	98.52	8.00e-150	523.00
IUUC-Pop-099764	Populus trichocarpa	43.59	7.00e-59	222.00
IUUC-Pca-101121	Procavia capensis	80.00	5.00e-128	451.00
IUUC-Ppe-102076	Prunus persica	42.35	5.00e-56	213.00
IUUC-Pva-102489	Pteropus vampyrus	98.18	5.00e-152	531.00
IUUC-Pgr-103568	Puccinia graminis	41.70	7.00e-49	189.00
IUUC-Ptt-103721	Puccinia triticina	37.08	6.00e-30	125.00
IUUC-Pte-104118	Pyrenophora teres	42.98	2.00e-54	207.00
IUUC-Pyt-104612	Pyrenophora triticirepentis	42.98	1.00e-54	208.00
IUUC-Rno-105627	Rattus norvegicus	98.52	1.00e-149	523.00
IUUC-Sce-106312	Saccharomyces cerevisiae	44.90	2.00e-54	206.00
IUUC-Sha-106619	Sarcophilus harrisii	98.52	5.00e-150	524.00
IUUC-Sja-107765	Schizosaccharomyces japonicus	50.65	2.00e-56	213.00
IUUC-Spo-108328	Schizosaccharomyces pombe	51.29	8.00e-62	231.00
IUUC-Ssl-108577	Sclerotinia sclerotiorum	44.17	3.00e-51	196.00
IUUC-Smo-108760	Selaginella moellendorffii	44.21	6.00e-58	216.00
IUUC-Sit-109923	Setaria italica	40.68	1.00e-52	201.00
IUUC-Sly-110900	Solanum lycopersicum	39.48	1.00e-50	194.00
IUUC-Stu-112226	Solanum tuberosum	39.48	2.00e-50	194.00
IUUC-Sar-113620	Sorex araneus	98.18	2.00e-150	525.00
IUUC-Sbi-114318	Sorghum bicolor	40.95	3.00e-54	207.00
IUUC-Sre-114956	Sporisorium reilianum	47.74	3.00e-65	243.00
IUUC-Ssc-116116	Sus scrofa	96.43	4.00e-151	526.00
IUUC-Tgu-117357	Taeniopygia guttata	85.56	0.00e+00	1065.00
IUUC-Tru-118759	Takifugu rubripes	68.66	0.00e+00	847.00
IUUC-Tsy-119387	Tarsius syrichta	98.18	4.00e-152	531.00
IUUC-Tni-120536	Tetraodon nigroviridis	82.91	2.00e-130	459.00
IUUC-Tca-121035	Theobroma cacao	45.74	1.00e-57	218.00
IUUC-Tre-121996	Trichoderma reesei	42.80	7.00e-48	186.00
IUUC-Tvi-122371	Trichoderma virens	44.07	1.00e-54	209.00
IUUC-Tae-124373	Triticum aestivum	42.92	4.00e-54	206.00
IUUC-Tur-126324	Triticum urartu	42.92	2.00e-54	207.00
IUUC-Tme-127072	Tuber melanosporum	40.00	1.00e-42	168.00
IUUC-Tbe-128107	Tupaia belangeri	93.09	9.00e-147	513.00
IUUC-Ttr-128846	Tursiops truncatus	98.55	5.00e-152	531.00
IUUC-Uma-129607	Ustilago maydis	47.74	2.00e-65	243.00
IUUC-Vda-129971	Verticillium dahliae	42.86	2.00e-47	184.00
IUUC-Vpa-130298	Vicugna pacos	86.55	7.00e-128	451.00
IUUC-Vvi-131651	Vitis vinifera	45.74	2.00e-58	221.00
IUUC-Xma-133789	Xiphophorus maculatus	68.48	0.00e+00	711.00
IUUC-Yli-134461	Yarrowia lipolytica	42.22	2.00e-47	182.00
IUUC-Zma-135031	Zea mays	42.37	2.00e-54	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence