iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113852

UUCD1 version

UUC-SoB-00073

Ensembl Protein ID

Sb07g004890.1

UniProt Accession

A0A1B6PG21; A0A1B6PG21_SORBI

Genbank Protein ID

KXG24577.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G061000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g004890	Sb07g004890.1	Sb07g004890.1
Sb07g004890	Sb07g004890.2	Sb07g004890.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-24	85.6	108	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v  +a+ +  +llvsGs+D+t++ WD+r+ +++
   Q: 108  HDAPVKEVAWiPQmNLLVSGSWDKTLRYWDTRQANPV 144
           89999******777*****************998876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASLTGLAAN PNPNKSFEIL PNPGDSVSSL SFSPKSNLLV ATSWDNQVRC WEIVGGNSQP 60
KASISHDQPV LCSAWKDDGT TVFSGGCDKQ VKMWPLLSGG QPQTVAMHDA PVKEVAWIPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAGCTGCA TCCACTCGTG GCTGTCTGCT TGTCTTGCCC CCCTCTCGCT CTCCGACGAC 60
TGGTGCGCCG CGCCGCCGCC GCCCTAAGCC AGGTGCTGAG GCTTTATTTC GTCTCTTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	88.37	3.00e-176	610.00
IUUC-Atr-002609	Amborella trichopoda	80.06	7.00e-160	555.00
IUUC-Aly-006015	Arabidopsis lyrata	79.53	6.00e-166	575.00
IUUC-Ath-007659	Arabidopsis thaliana	80.18	3.00e-165	573.00
IUUC-Ago-008004	Ashbya gossypii	43.45	2.00e-76	278.00
IUUC-Bdi-015050	Brachypodium distachyon	92.38	5.00e-180	622.00
IUUC-Bol-015367	Brassica oleracea	79.17	5.00e-165	572.00
IUUC-Bra-016903	Brassica rapa	79.17	5.00e-165	572.00
IUUC-Cel-018563	Caenorhabditis elegans	39.53	2.00e-66	245.00
IUUC-Dse-031161	Dothistroma septosporum	45.82	7.00e-73	266.00
IUUC-Dme-032009	Drosophila melanogaster	47.41	4.00e-86	310.00
IUUC-Ggr-040019	Gaeumannomyces graminis	43.03	5.00e-76	276.00
IUUC-Gma-043683	Glycine max	81.44	6.00e-169	585.00
IUUC-Hsa-046779	Homo sapiens	50.79	6.00e-89	320.00
IUUC-Hvu-047380	Hordeum vulgare	92.38	4.00e-179	619.00
IUUC-Kpa-049284	Komagataella pastoris	45.82	9.00e-83	299.00
IUUC-Lch-050559	Latimeria chalumnae	43.90	1.00e-80	292.00
IUUC-Lpe-051050	Leersia perrieri	95.18	0.00e+00	664.00
IUUC-Lma-053085	Leptosphaeria maculans	41.01	4.00e-69	254.00
IUUC-Mpo-057390	Magnaporthe poae	43.34	5.00e-77	280.00
IUUC-Mtr-057675	Medicago truncatula	78.57	2.00e-165	573.00
IUUC-Mac-064968	Musa acuminata	79.89	2.00e-161	560.00
IUUC-Mpu-065722	Mustela putorius furo	50.45	1.00e-91	329.00
IUUC-Nle-069395	Nomascus leucogenys	46.49	3.00e-66	244.00
IUUC-Ocu-074961	Oryctolagus cuniculus	51.25	6.00e-90	323.00
IUUC-Oba-075879	Oryza barthii	95.74	0.00e+00	662.00
IUUC-Obr-076326	Oryza brachyantha	93.37	0.00e+00	658.00
IUUC-Ogl-077767	Oryza glaberrima	95.18	0.00e+00	664.00
IUUC-Ogu-078312	Oryza glumaepatula	87.96	8.00e-171	593.00
IUUC-Oin-080219	Oryza indica	95.18	0.00e+00	664.00
IUUC-Olo-081007	Oryza longistaminata	95.18	0.00e+00	664.00
IUUC-Oni-082844	Oryza nivara	95.18	0.00e+00	664.00
IUUC-Opu-083511	Oryza punctata	88.48	0.00e+00	645.00
IUUC-Oru-085012	Oryza rufipogon	95.18	0.00e+00	664.00
IUUC-Osa-085287	Oryza sativa	95.18	0.00e+00	664.00
IUUC-Ptr-091097	Pan troglodytes	50.15	2.00e-91	327.00
IUUC-Pno-094920	Phaeosphaeria nodorum	40.32	4.00e-63	234.00
IUUC-Ppa-095202	Physcomitrella patens	71.76	6.00e-113	399.00
IUUC-Pop-099348	Populus trichocarpa	82.01	2.00e-159	553.00
IUUC-Ppe-101817	Prunus persica	83.02	8.00e-163	565.00
IUUC-Pte-104387	Pyrenophora teres	41.32	4.00e-69	254.00
IUUC-Sce-106379	Saccharomyces cerevisiae	43.83	9.00e-80	289.00
IUUC-Smo-109611	Selaginella moellendorffii	71.86	1.00e-147	514.00
IUUC-Sit-110521	Setaria italica	98.48	0.00e+00	683.00
IUUC-Sly-111037	Solanum lycopersicum	80.85	1.00e-163	568.00
IUUC-Tsy-119523	Tarsius syrichta	51.26	2.00e-79	288.00
IUUC-Tca-121802	Theobroma cacao	82.01	3.00e-167	579.00
IUUC-Tae-124794	Triticum aestivum	92.68	2.00e-179	620.00
IUUC-Tur-126720	Triticum urartu	82.29	5.00e-164	569.00
IUUC-Tbe-127319	Tupaia belangeri	43.28	2.00e-47	182.00
IUUC-Vpa-130076	Vicugna pacos	44.59	2.00e-69	254.00
IUUC-Vvi-131104	Vitis vinifera	82.67	2.00e-168	584.00
IUUC-Yli-134431	Yarrowia lipolytica	45.57	3.00e-75	274.00
IUUC-Zma-135606	Zea mays	98.57	2.00e-168	585.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence