iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114232

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G216700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g027180	Sb09g027180.1	Sb09g027180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-14	53.2	113	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH+d++ +l+    + + + sGs D+++++WDlr 
   Q: 113  GHKDRIVSLCMspvN-DSFMSGSLDHSVRIWDLRV 146
           8**********9633.89**************985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAALPQLDD EIVRGMAIGA VFTDYAGKIN CLDFHRKEDL LVTSSDDDSI RLYNITSATL 60
LKTTYHRKHG ADRVCFTHHP SSILCSSRYN LESAESLRYL SLYDNRCLRY FKGHKDRIVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG CGTTGCCGCA GCTGGACGAC GAGATCGTCC GCGGCATGGC CATCGGCGCT 60
GTCTTCACCG ACTATGTGAG TTCCGGTGCT AGAAGCCCCA ACCCACCTAT TTTTTGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation
GO:0048586--P:regulation of long-day photoperiodism, flowering
GO:0048510--P:regulation of timing of transition from vegetative to reproductive phase

KEGG

sbi:SORBI_09g027180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001012	Aegilops tauschii	87.50	7.00e-89	319.00
IUUC-Atr-002592	Amborella trichopoda	82.20	3.00e-113	400.00
IUUC-Aly-005437	Arabidopsis lyrata	80.26	4.00e-112	396.00
IUUC-Ath-006793	Arabidopsis thaliana	80.26	2.00e-112	397.00
IUUC-Bgr-012008	Blumeria graminis	37.67	2.00e-34	139.00
IUUC-Bdi-015066	Brachypodium distachyon	97.02	4.00e-135	473.00
IUUC-Bol-016019	Brassica oleracea	79.83	2.00e-111	394.00
IUUC-Bra-017871	Brassica rapa	79.83	1.00e-111	395.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	35.11	3.00e-32	131.00
IUUC-Cne-026890	Cryptococcus neoformans	35.98	2.00e-24	105.00
IUUC-Dse-031152	Dothistroma septosporum	36.68	5.00e-36	144.00
IUUC-Fox-037858	Fusarium oxysporum	36.65	3.00e-36	145.00
IUUC-Fso-038386	Fusarium solani	34.98	7.00e-29	120.00
IUUC-Gma-044074	Glycine max	82.63	6.00e-119	419.00
IUUC-Hvu-047731	Hordeum vulgare	93.19	4.00e-130	456.00
IUUC-Lpe-050830	Leersia perrieri	96.10	8.00e-133	465.00
IUUC-Laf-054265	Loxodonta africana	38.99	1.00e-44	172.00
IUUC-Mor-057267	Magnaporthe oryzae	38.34	4.00e-31	127.00
IUUC-Mtr-058200	Medicago truncatula	82.63	8.00e-119	419.00
IUUC-Mac-065314	Musa acuminata	85.47	9.00e-122	428.00
IUUC-Oba-075394	Oryza barthii	81.28	8.00e-107	378.00
IUUC-Obr-076456	Oryza brachyantha	97.02	4.00e-136	476.00
IUUC-Ogl-076973	Oryza glaberrima	97.87	1.00e-136	478.00
IUUC-Ogu-078296	Oryza glumaepatula	81.28	8.00e-107	378.00
IUUC-Oin-079656	Oryza indica	97.87	1.00e-136	478.00
IUUC-Olo-080893	Oryza longistaminata	81.28	3.00e-107	380.00
IUUC-Ome-081559	Oryza meridionalis	90.30	1.00e-85	307.00
IUUC-Oni-083104	Oryza nivara	81.28	8.00e-107	378.00
IUUC-Opu-084098	Oryza punctata	77.02	4.00e-98	350.00
IUUC-Oru-084364	Oryza rufipogon	81.28	3.00e-107	380.00
IUUC-Osa-086296	Oryza sativa	97.87	1.00e-136	478.00
IUUC-Pno-094960	Phaeosphaeria nodorum	34.88	7.00e-35	140.00
IUUC-Ppa-095292	Physcomitrella patens	72.61	8.00e-101	359.00
IUUC-Pop-099608	Populus trichocarpa	83.26	3.00e-119	420.00
IUUC-Ppe-101452	Prunus persica	83.05	2.00e-119	421.00
IUUC-Pte-104129	Pyrenophora teres	35.81	3.00e-34	139.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	35.81	1.00e-34	139.00
IUUC-Sce-106257	Saccharomyces cerevisiae	34.56	7.00e-31	126.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	36.44	2.00e-33	135.00
IUUC-Spo-108206	Schizosaccharomyces pombe	38.53	1.00e-39	156.00
IUUC-Smo-108979	Selaginella moellendorffii	68.70	5.00e-95	339.00
IUUC-Sit-109858	Setaria italica	97.86	3.00e-136	476.00
IUUC-Sly-111267	Solanum lycopersicum	79.40	2.00e-112	397.00
IUUC-Tca-121853	Theobroma cacao	84.12	2.00e-120	424.00
IUUC-Tae-124428	Triticum aestivum	94.47	5.00e-133	466.00
IUUC-Tme-126883	Tuber melanosporum	36.78	3.00e-41	161.00
IUUC-Vvi-131587	Vitis vinifera	83.26	6.00e-119	419.00
IUUC-Zma-134685	Zea mays	97.87	3.00e-137	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence