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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105082
Ensembl Protein ID ENSRNOP00000005803.5
UniProt Accession F1M7P1; F1M7P1_RAT
Genbank Protein ID ENSRNOP00000005803
Protein Name DDB1 and CUL4-associated factor 13
Genbank Nucleotide ID AABR07073317
Gene Name Dcaf13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000004301.6 ENSRNOT00000005803.6 ENSRNOP00000005803.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-23 82.4 64 103
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+cla    +  +++sG+ Dg +k+W+l++ ++++
   Q: 64   GHRDGVNCLAKhpKSlATVLSGACDGEVKIWNLTKRKCIR 103
           8********844422344899*************999987 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MKVKMLSRNP DNYVRETKLD IQRVPRNYDP TLHPFEVPRE YVRALNATKL ERVFAKPFLA 60
SLDGHRDGVN CLAKHPKSLA TVLSGACDGE VKIWNLTKRK CIRTIQAHEG FVRGICTRFC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105082|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGTGGAGGCC GGGTTAAGTC GAGCTCGGCT TAAAGGCTCG AGGAGTCCTA GACCCAGAGC 60
CGCCAAAATG AAGGTGAAAA TGCTGAGCCG GAACCCTGAC AACTATGTCC GCGAAACCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105082|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04158--Sof1
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG rno:362902
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002178 Ailuropoda melanoleuca 92.13 0.00e+00 875.00
IUUC-Atr-002799 Amborella trichopoda 47.35 2.00e-132 465.00
IUUC-Apl-003675 Anas platyrhynchos 83.63 0.00e+00 775.00
IUUC-Aca-004792 Anolis carolinensis 84.72 0.00e+00 825.00
IUUC-Aly-005998 Arabidopsis lyrata 46.24 3.00e-130 458.00
IUUC-Ath-007526 Arabidopsis thaliana 46.24 5.00e-130 457.00
IUUC-Ago-007774 Ashbya gossypii 46.34 6.00e-120 424.00
IUUC-Acl-008024 Aspergillus clavatus 43.72 7.00e-110 390.00
IUUC-Afu-008930 Aspergillus fumigatus 43.01 4.00e-108 384.00
IUUC-Ani-009370 Aspergillus nidulans 43.75 4.00e-109 388.00
IUUC-Ang-009827 Aspergillus niger 45.98 2.00e-113 402.00
IUUC-Aor-010060 Aspergillus oryzae 44.42 1.00e-106 380.00
IUUC-Ate-010434 Aspergillus terreus 45.58 5.00e-94 337.00
IUUC-Ame-011967 Astyanax mexicanus 73.97 0.00e+00 717.00
IUUC-Bgr-011989 Blumeria graminis 44.69 1.00e-111 396.00
IUUC-Bta-013291 Bos taurus 68.15 0.00e+00 627.00
IUUC-Bci-013868 Botrytis cinerea 43.02 1.00e-107 383.00
IUUC-Bdi-014343 Brachypodium distachyon 48.01 3.00e-125 441.00
IUUC-Bol-015740 Brassica oleracea 44.03 7.00e-120 423.00
IUUC-Bra-016689 Brassica rapa 44.03 4.00e-118 417.00
IUUC-Cel-018536 Caenorhabditis elegans 50.12 2.00e-123 435.00
IUUC-Cja-018779 Callithrix jacchus 93.71 0.00e+00 893.00
IUUC-Cfa-020105 Canis familiaris 93.93 0.00e+00 894.00
IUUC-Cpo-021538 Cavia porcellus 92.81 0.00e+00 858.00
IUUC-Cre-022798 Chlamydomonas reinhardtii 50.31 2.00e-46 177.00
IUUC-Csa-023492 Chlorocebus sabaeus 93.03 0.00e+00 890.00
IUUC-Cho-024497 Choloepus hoffmanni 79.94 1.00e-153 536.00
IUUC-Cin-025524 Ciona intestinalis 64.25 6.00e-175 606.00
IUUC-Csv-026197 Ciona savignyi 63.35 1.00e-174 605.00
IUUC-Cgl-026745 Colletotrichum gloeosporioides 40.53 4.00e-96 345.00
IUUC-Cne-026840 Cryptococcus neoformans 36.95 5.00e-81 296.00
IUUC-Cme-027111 Cyanidioschyzon merolae 34.98 3.00e-73 268.00
IUUC-Dre-027471 Danio rerio 74.88 0.00e+00 723.00
IUUC-Dno-029790 Dasypus novemcinctus 90.58 0.00e+00 696.00
IUUC-Dor-030971 Dipodomys ordii 76.40 0.00e+00 706.00
IUUC-Dse-031563 Dothistroma septosporum 44.79 1.00e-107 383.00
IUUC-Dme-032161 Drosophila melanogaster 59.50 2.00e-165 575.00
IUUC-Ete-033127 Echinops telfairi 86.58 0.00e+00 817.00
IUUC-Eca-033531 Equus caballus 92.45 0.00e+00 840.00
IUUC-Eeu-034663 Erinaceus europaeus 80.31 0.00e+00 734.00
IUUC-Fca-036258 Felis catus 94.16 0.00e+00 897.00
IUUC-Fal-037456 Ficedula albicollis 87.19 0.00e+00 795.00
IUUC-Fox-038025 Fusarium oxysporum 43.62 4.00e-106 378.00
IUUC-Fso-038344 Fusarium solani 42.67 2.00e-101 362.00
IUUC-Gmo-039643 Gadus morhua 76.18 0.00e+00 749.00
IUUC-Ggr-039816 Gaeumannomyces graminis 45.18 5.00e-105 374.00
IUUC-Gga-040143 Gallus gallus 87.42 0.00e+00 818.00
IUUC-Gac-041665 Gasterosteus aculeatus 77.83 0.00e+00 746.00
IUUC-Gma-043073 Glycine max 46.46 3.00e-127 448.00
IUUC-Ggo-045058 Gorilla gorilla 92.81 0.00e+00 887.00
IUUC-Hsa-046843 Homo sapiens 92.58 0.00e+00 883.00
IUUC-Hvu-047654 Hordeum vulgare 47.04 5.00e-74 270.00
IUUC-Itr-048822 Ictidomys tridecemlineatus 94.83 0.00e+00 909.00
IUUC-Kpa-049232 Komagataella pastoris 47.05 4.00e-123 434.00
IUUC-Lch-050542 Latimeria chalumnae 79.24 0.00e+00 798.00
IUUC-Lpe-051622 Leersia perrieri 48.01 2.00e-127 449.00
IUUC-Loc-052674 Lepisosteus oculatus 75.82 0.00e+00 736.00
IUUC-Lma-053108 Leptosphaeria maculans 43.97 1.00e-108 386.00
IUUC-Laf-053385 Loxodonta africana 93.48 0.00e+00 869.00
IUUC-Mcc-055151 Macaca mulatta 92.58 0.00e+00 888.00
IUUC-Meu-056230 Macropus eugenii 89.52 2.00e-117 416.00
IUUC-Mor-057013 Magnaporthe oryzae 43.26 9.00e-101 360.00
IUUC-Mpo-057530 Magnaporthe poae 45.18 6.00e-106 377.00
IUUC-Mtr-058187 Medicago truncatula 46.68 8.00e-127 446.00
IUUC-Mla-058964 Melampsora laricipopulina 39.47 2.00e-92 333.00
IUUC-Mga-059712 Meleagris gallopavo 87.44 0.00e+00 778.00
IUUC-Mvi-060370 Microbotryum violaceum 32.65 1.00e-71 264.00
IUUC-Mmr-061340 Microcebus murinus 88.64 0.00e+00 828.00
IUUC-Mdo-062978 Monodelphis domestica 86.52 0.00e+00 834.00
IUUC-Mmu-063439 Mus musculus 97.08 0.00e+00 910.00
IUUC-Mac-065129 Musa acuminata 47.54 2.00e-133 469.00
IUUC-Mpu-066548 Mustela putorius furo 83.66 0.00e+00 689.00
IUUC-Mlu-067660 Myotis lucifugus 93.93 0.00e+00 894.00
IUUC-Nfi-068455 Neosartorya fischeri 44.17 3.00e-111 395.00
IUUC-Ncr-068848 Neurospora crassa 42.23 1.00e-97 350.00
IUUC-Nle-069923 Nomascus leucogenys 93.03 0.00e+00 885.00
IUUC-Opr-070279 Ochotona princeps 81.58 2.00e-90 325.00
IUUC-Ont-072234 Oreochromis niloticus 77.98 0.00e+00 764.00
IUUC-Oan-073713 Ornithorhynchus anatinus 84.02 1.00e-100 358.00
IUUC-Ocu-073782 Oryctolagus cuniculus 93.48 0.00e+00 890.00
IUUC-Oba-075161 Oryza barthii 48.45 1.00e-128 452.00
IUUC-Obr-076868 Oryza brachyantha 48.23 9.00e-128 450.00
IUUC-Ogl-077062 Oryza glaberrima 48.45 1.00e-128 452.00
IUUC-Ogu-078308 Oryza glumaepatula 48.45 1.00e-128 452.00
IUUC-Oin-079378 Oryza indica 48.45 1.00e-128 452.00
IUUC-Olo-080638 Oryza longistaminata 45.80 6.00e-117 414.00
IUUC-Oni-082368 Oryza nivara 48.45 1.00e-128 452.00
IUUC-Opu-083628 Oryza punctata 48.45 1.00e-128 452.00
IUUC-Oru-085226 Oryza rufipogon 48.23 4.00e-128 451.00
IUUC-Osa-085368 Oryza sativa 44.11 4.00e-68 251.00
IUUC-Ola-086836 Oryzias latipes 79.78 0.00e+00 777.00
IUUC-Olu-087755 Ostreococcus lucimarinus 45.08 4.00e-125 441.00
IUUC-Oga-088170 Otolemur garnettii 92.81 0.00e+00 885.00
IUUC-Oar-089388 Ovis aries 92.13 0.00e+00 882.00
IUUC-Ptr-090494 Pan troglodytes 92.81 0.00e+00 884.00
IUUC-Pan-091697 Papio anubis 93.03 0.00e+00 889.00
IUUC-Psi-093916 Pelodiscus sinensis 83.60 0.00e+00 776.00
IUUC-Pno-095004 Phaeosphaeria nodorum 41.29 8.00e-99 353.00
IUUC-Ppa-095514 Physcomitrella patens 46.68 2.00e-132 465.00
IUUC-Pfo-097432 Poecilia formosa 78.50 0.00e+00 734.00
IUUC-Pab-098423 Pongo abelii 93.48 0.00e+00 890.00
IUUC-Pop-099649 Populus trichocarpa 47.45 5.00e-131 461.00
IUUC-Pca-100365 Procavia capensis 87.64 0.00e+00 793.00
IUUC-Ppe-101379 Prunus persica 46.00 3.00e-128 451.00
IUUC-Pva-102845 Pteropus vampyrus 93.93 0.00e+00 884.00
IUUC-Pgr-103469 Puccinia graminis 34.30 5.00e-84 305.00
IUUC-Ptt-103980 Puccinia triticina 36.02 7.00e-65 241.00
IUUC-Pte-104111 Pyrenophora teres 43.62 5.00e-106 377.00
IUUC-Pyt-104610 Pyrenophora triticirepentis 43.75 5.00e-106 377.00
IUUC-Sce-106340 Saccharomyces cerevisiae 45.61 1.00e-121 429.00
IUUC-Sha-106584 Sarcophilus harrisii 87.42 0.00e+00 838.00
IUUC-Sja-107703 Schizosaccharomyces japonicus 44.74 3.00e-104 371.00
IUUC-Spo-108046 Schizosaccharomyces pombe 46.43 1.00e-109 389.00
IUUC-Ssl-108574 Sclerotinia sclerotiorum 43.46 6.00e-108 384.00
IUUC-Smo-109548 Selaginella moellendorffii 46.88 4.00e-129 454.00
IUUC-Sit-110242 Setaria italica 48.01 2.00e-125 442.00
IUUC-Sly-111762 Solanum lycopersicum 46.90 8.00e-127 447.00
IUUC-Stu-112156 Solanum tuberosum 46.90 2.00e-126 445.00
IUUC-Sbi-114739 Sorghum bicolor 48.67 6.00e-127 447.00
IUUC-Sre-114951 Sporisorium reilianum 38.80 1.00e-102 366.00
IUUC-Ssc-115510 Sus scrofa 92.58 0.00e+00 883.00
IUUC-Tgu-117234 Taeniopygia guttata 87.91 0.00e+00 753.00
IUUC-Tru-117986 Takifugu rubripes 77.73 0.00e+00 760.00
IUUC-Tsy-119252 Tarsius syrichta 89.02 0.00e+00 803.00
IUUC-Tni-119785 Tetraodon nigroviridis 77.94 0.00e+00 717.00
IUUC-Tca-121222 Theobroma cacao 46.68 1.00e-126 446.00
IUUC-Tre-122243 Trichoderma reesei 44.07 2.00e-105 375.00
IUUC-Tvi-122293 Trichoderma virens 43.85 2.00e-103 369.00
IUUC-Tae-124591 Triticum aestivum 45.35 8.00e-112 397.00
IUUC-Tur-126098 Triticum urartu 44.30 1.00e-107 383.00
IUUC-Tme-127200 Tuber melanosporum 47.98 1.00e-126 446.00
IUUC-Tbe-127568 Tupaia belangeri 92.48 5.00e-129 454.00
IUUC-Ttr-129185 Tursiops truncatus 82.70 0.00e+00 764.00
IUUC-Uma-129353 Ustilago maydis 39.00 4.00e-102 365.00
IUUC-Vda-129768 Verticillium dahliae 43.14 1.00e-100 360.00
IUUC-Vpa-130572 Vicugna pacos 93.48 0.00e+00 892.00
IUUC-Vvi-131555 Vitis vinifera 47.12 2.00e-127 449.00
IUUC-Xtr-132263 Xenopus tropicalis 79.95 0.00e+00 635.00
IUUC-Xma-133925 Xiphophorus maculatus 78.97 0.00e+00 739.00
IUUC-Yli-134384 Yarrowia lipolytica 45.54 1.00e-114 406.00
IUUC-Zma-135616 Zea mays 48.45 6.00e-126 444.00
Created Date 25-Jun-2017

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