iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Tag

Content

iUUCD ID

IUUC-Bol-016246

Ensembl Protein ID

UniProt Accession

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g130840	Bo4g130840.1	Bo4g130840.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/Other	26.72	1.60e-01	33.90	IUUC-Sce-106374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MFMLFSLFLQ TLCEIRRKTP VSGFRTSCAA VSVSLYEEEP FHEKETDSVE SRGIRPNHQT 60
FTWLLEGCLK RNGSLDEGRK LHGQILKLGF DNNASLSEKL LDLYLFKGDL NGAWKVFDEM 120

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Nucleotide Sequence
(Fasta)

ATGTTTATGC TCTTCTCTCT TTTTCTGCAG ACACTTTGTG AGATCAGAAG AAAGACACCA 60
GTCTCCGGTT TCCGAACTAG TTGTGCTGCT GTGTCTGTAT CTCTCTATGA AGAGGAGCCG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR032867--DYW_dom
IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom

PROSITE

Pfam

PF14432--DYW_deaminase
PF01535--PPR
PF13041--PPR_2
PF13812--PPR_3

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002827	Amborella trichopoda	31.08	5.00e-65	241.00
IUUC-Aly-006321	Arabidopsis lyrata	36.36	4.00e-68	252.00
IUUC-Ath-006990	Arabidopsis thaliana	30.58	3.00e-122	432.00
IUUC-Bdi-014037	Brachypodium distachyon	28.42	3.00e-47	182.00
IUUC-Fso-038106	Fusarium solani	30.00	1.20e+00	28.10
IUUC-Gmo-038599	Gadus morhua	22.64	1.80e-01	30.80
IUUC-Lpe-050946	Leersia perrieri	34.33	5.00e-139	488.00
IUUC-Mtr-058695	Medicago truncatula	33.71	1.00e-146	513.00
IUUC-Oba-075207	Oryza barthii	36.38	2.00e-81	297.00
IUUC-Ome-081873	Oryza meridionalis	39.36	1.00e-73	271.00
IUUC-Pop-100074	Populus trichocarpa	24.46	3.00e-19	88.60
IUUC-Ppe-101554	Prunus persica	30.81	1.00e-98	354.00
IUUC-Sce-106374	Saccharomyces cerevisiae	26.45	6.70e-02	33.50
IUUC-Smo-109647	Selaginella moellendorffii	31.26	3.00e-106	379.00
IUUC-Sly-111419	Solanum lycopersicum	31.98	7.00e-57	216.00
IUUC-Tca-121040	Theobroma cacao	34.15	4.00e-144	505.00
IUUC-Tur-126385	Triticum urartu	39.86	2.00e-140	493.00

Created Date

25-Jun-2017

Protein Fasta Sequence