iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043414

Ensembl Protein ID

GLYMA01G00460.1

UniProt Accession

I1J4A5; I1J4A5_SOYBN

Genbank Protein ID

KRH74138.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000834

Gene Name

LOC100795420; GLYMA_01G001600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G00460	GLYMA01G00460.1	GLYMA01G00460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-29	102.4	555	586
UBD/Beta-Prp	3.20e-53	182.5	239	509

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd++t+l+f  d + l+s+s Dg++++WD+
   Q: 555  GHTDRITDLCFsEDgKWLLSSSMDGSLRIWDV 586
           8**********955699**************6 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvw..dlstgkc..vhtlkghedsvlslsfspsgdklvsG 112
           lla+g+ +g i +w+++++ l + + + h++ +t++ f  ++++l+++s D+ +k w  d s+g++  ++  +gh++   +l+f+++g +++s+
   Q: 239  LLASGGSSGVISIWNLEKKRLQSVVrEAHDSVITSLHFFANEPVLMSSSADNSVKMWifDTSDGDPrlLRFRSGHSAPPFCLKFYANGRHILSA 332
           79****************999888899******************************9988866551166667********************* PP
   S: 113  shdrtirvwdletgqclee...................tlsghdgvvncvvvhpdg.nllvsGslDrt.vrlWdlktgkllrtl....tgghtd 181
           ++dr  r++ + ++q ++e                   ++ + + +  c+++ + + + +v+++ D++   lW+l++  l ++      + +  
   Q: 333  GQDRAFRLFSVVQDQQSRElsqwhvskrarklklkeeeIKLKPMIAFDCAEIRERDwCNVVTCHMDTAqAYLWRLQNFVLGEHIlnpcPE-NPT 425
           ********888888888888888888888888899999888899999*******************86378**99655555544788655.99* PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgec........vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           +v+  +++  g+++  g   g ++ ++lq+g c          +  +h+  v  v+ ++ +++++s++ +g i++Wd + +dl 
   Q: 426  PVKACAISACGNFVFLGTAGGWIERFNLQSGICrgayidisESRSCAHDGEVVGVACDSTNTLMISAGYEGDIKVWDFKERDLK 509
           *********************************8888887766667788****************************9999876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGIFEPYRAI GCITSSVPFS VQRLGTETFL TVSVGKAFQI FNCAKLNLVL VGPQLPKKIS 60
ALASYREYTF AAYGNNIAVF KRAHQFATWS SHNAKVKLLL LFGDHIVSVD ARGNMFLWPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAACTTCT CTAGCTAAAT CATTATCCAC ATTTCAACTC TATAATATAA CATTTTAAAT 60
CTATAAAAAT ACATATTTTT TATTTAACAA TATAATATGA TACTGAACAG AGAGGGAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

gmx:100795420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002859	Amborella trichopoda	67.83	0.00e+00	1161.00
IUUC-Ago-007763	Ashbya gossypii	31.10	3.00e-117	416.00
IUUC-Acl-008275	Aspergillus clavatus	31.06	1.00e-81	297.00
IUUC-Afl-008457	Aspergillus flavus	31.51	9.00e-79	288.00
IUUC-Afu-008914	Aspergillus fumigatus	29.96	2.00e-87	317.00
IUUC-Ani-009225	Aspergillus nidulans	30.78	8.00e-89	322.00
IUUC-Aor-010046	Aspergillus oryzae	30.20	5.00e-103	369.00
IUUC-Ate-010337	Aspergillus terreus	29.69	3.00e-98	353.00
IUUC-Bgr-011973	Blumeria graminis	28.42	2.00e-99	357.00
IUUC-Bci-013940	Botrytis cinerea	30.19	4.00e-118	419.00
IUUC-Bdi-014725	Brachypodium distachyon	70.19	0.00e+00	1299.00
IUUC-Cja-019675	Callithrix jacchus	34.87	2.00e-157	549.00
IUUC-Cfa-020118	Canis familiaris	35.71	1.00e-151	530.00
IUUC-Csa-023547	Chlorocebus sabaeus	35.56	1.00e-147	517.00
IUUC-Cho-024518	Choloepus hoffmanni	30.87	2.00e-100	360.00
IUUC-Cin-025339	Ciona intestinalis	32.52	4.00e-143	502.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.07	2.00e-100	360.00
IUUC-Cne-026859	Cryptococcus neoformans	33.63	2.00e-135	476.00
IUUC-Cme-027173	Cyanidioschyzon merolae	27.29	9.00e-81	295.00
IUUC-Dor-030329	Dipodomys ordii	33.61	3.00e-65	243.00
IUUC-Dse-031511	Dothistroma septosporum	28.83	5.00e-91	329.00
IUUC-Dme-031694	Drosophila melanogaster	32.87	1.00e-130	460.00
IUUC-Fox-037787	Fusarium oxysporum	30.47	2.00e-97	350.00
IUUC-Fso-038378	Fusarium solani	30.16	1.00e-99	358.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.55	5.00e-97	349.00
IUUC-Ggo-045463	Gorilla gorilla	34.64	4.00e-148	519.00
IUUC-Hsa-045675	Homo sapiens	35.01	2.00e-150	526.00
IUUC-Kpa-049164	Komagataella pastoris	32.63	3.00e-116	412.00
IUUC-Lpe-051556	Leersia perrieri	65.63	0.00e+00	922.00
IUUC-Lma-052961	Leptosphaeria maculans	30.43	9.00e-90	325.00
IUUC-Laf-054006	Loxodonta africana	34.64	8.00e-142	498.00
IUUC-Mcc-055037	Macaca mulatta	35.09	3.00e-149	522.00
IUUC-Mor-057280	Magnaporthe oryzae	29.30	3.00e-100	360.00
IUUC-Mpo-057408	Magnaporthe poae	28.50	4.00e-90	326.00
IUUC-Mtr-058473	Medicago truncatula	86.29	0.00e+00	1579.00
IUUC-Mla-058892	Melampsora laricipopulina	34.03	7.00e-115	408.00
IUUC-Mvi-060334	Microbotryum violaceum	33.71	6.00e-115	408.00
IUUC-Mmr-061239	Microcebus murinus	34.80	5.00e-148	518.00
IUUC-Mmu-063872	Mus musculus	36.17	6.00e-159	554.00
IUUC-Mac-064631	Musa acuminata	73.03	0.00e+00	1209.00
IUUC-Mpu-066039	Mustela putorius furo	35.53	4.00e-162	565.00
IUUC-Nfi-068319	Neosartorya fischeri	29.15	7.00e-99	355.00
IUUC-Ncr-068725	Neurospora crassa	30.43	5.00e-105	375.00
IUUC-Nle-069050	Nomascus leucogenys	35.20	6.00e-150	525.00
IUUC-Oba-075407	Oryza barthii	65.42	0.00e+00	1134.00
IUUC-Obr-076451	Oryza brachyantha	71.48	0.00e+00	1342.00
IUUC-Ogl-077535	Oryza glaberrima	71.08	0.00e+00	1301.00
IUUC-Oin-079431	Oryza indica	71.59	0.00e+00	1310.00
IUUC-Olo-080495	Oryza longistaminata	64.09	0.00e+00	1111.00
IUUC-Oni-082336	Oryza nivara	68.87	0.00e+00	1231.00
IUUC-Opu-084028	Oryza punctata	65.87	0.00e+00	1097.00
IUUC-Osa-086242	Oryza sativa	71.59	0.00e+00	1310.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.94	5.00e-157	548.00
IUUC-Ptr-090477	Pan troglodytes	34.83	2.00e-148	520.00
IUUC-Pan-092914	Papio anubis	35.09	2.00e-149	523.00
IUUC-Pno-094938	Phaeosphaeria nodorum	28.76	1.00e-86	315.00
IUUC-Ppa-095720	Physcomitrella patens	55.16	0.00e+00	1008.00
IUUC-Pab-097669	Pongo abelii	35.20	4.00e-150	525.00
IUUC-Pva-103152	Pteropus vampyrus	35.09	2.00e-152	533.00
IUUC-Pgr-103517	Puccinia graminis	30.94	6.00e-129	455.00
IUUC-Ptt-103697	Puccinia triticina	30.92	3.00e-97	349.00
IUUC-Pte-104121	Pyrenophora teres	28.14	1.00e-91	331.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	27.82	3.00e-90	327.00
IUUC-Rno-105435	Rattus norvegicus	35.40	4.00e-154	538.00
IUUC-Sce-106202	Saccharomyces cerevisiae	30.88	3.00e-104	373.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	36.47	1.00e-153	536.00
IUUC-Spo-108256	Schizosaccharomyces pombe	35.67	3.00e-151	529.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.83	2.00e-111	397.00
IUUC-Smo-108762	Selaginella moellendorffii	56.03	0.00e+00	1009.00
IUUC-Sit-110051	Setaria italica	70.09	0.00e+00	1328.00
IUUC-Sbi-114282	Sorghum bicolor	69.98	0.00e+00	1335.00
IUUC-Sre-114946	Sporisorium reilianum	30.07	3.00e-80	293.00
IUUC-Tru-118232	Takifugu rubripes	35.13	2.00e-138	486.00
IUUC-Tca-121506	Theobroma cacao	78.72	0.00e+00	1422.00
IUUC-Tre-122166	Trichoderma reesei	30.08	3.00e-108	386.00
IUUC-Tvi-122385	Trichoderma virens	29.84	9.00e-109	388.00
IUUC-Tme-127157	Tuber melanosporum	31.90	9.00e-116	411.00
IUUC-Tbe-127981	Tupaia belangeri	37.83	2.00e-130	460.00
IUUC-Uma-129439	Ustilago maydis	29.79	6.00e-87	316.00
IUUC-Vda-129760	Verticillium dahliae	29.88	1.00e-108	388.00
IUUC-Vvi-131086	Vitis vinifera	78.01	0.00e+00	1466.00
IUUC-Yli-134328	Yarrowia lipolytica	30.36	2.00e-102	367.00
IUUC-Zma-135808	Zea mays	69.21	0.00e+00	1326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence