iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107758

Ensembl Protein ID

EEB07084

UniProt Accession

B6K1Q3; B6K1Q3_SCHJY

Genbank Protein ID

EEB07084.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

KE651166

Gene Name

TIF34; SJAG_02164

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_02164	EEB07084	EEB07084

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-21	71.7	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ ++ ++   s+tl++sG+ D+t+++WD++tg++l
   Q: 50   GHTGAIWTCDInkSTTLMASGAADNTMRLWDVKTGKCL 87
           8**********9777*********************98 PP

Organism

Schizosaccharomyces japonicus

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPFILQGHT RPLTQIKYNH DGDLLFSCAK DLIINVWFSH NGERLGTYGG HTGAIWTCDI 60
NKSTTLMASG AADNTMRLWD VKTGKCLYVW EFPTAVKRVE FNEEGNKLLA VTEERMGFTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCACCACAA ATCCTAGTCC ACCCACAAAA ATTGGAGGTG AAGACAAACT CTTCACAAAC 60
TCCTACCTGC CAACAGCGCT ATGAGACCCT TCATTTTGCA GGGACACACC CGTCCTTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0002188--P:translation reinitiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	49.53	4.00e-27	113.00
IUUC-Aml-001321	Ailuropoda melanoleuca	52.31	2.00e-95	340.00
IUUC-Atr-002468	Amborella trichopoda	46.11	2.00e-47	179.00
IUUC-Apl-003841	Anas platyrhynchos	51.84	2.00e-97	346.00
IUUC-Aca-005123	Anolis carolinensis	51.53	4.00e-97	345.00
IUUC-Aly-006532	Arabidopsis lyrata	44.51	5.00e-83	298.00
IUUC-Ath-007094	Arabidopsis thaliana	45.76	3.00e-84	303.00
IUUC-Ago-008000	Ashbya gossypii	49.85	2.00e-100	357.00
IUUC-Acl-008098	Aspergillus clavatus	62.99	3.00e-127	446.00
IUUC-Afl-008494	Aspergillus flavus	63.41	2.00e-130	456.00
IUUC-Afu-009080	Aspergillus fumigatus	62.69	2.00e-128	449.00
IUUC-Ani-009230	Aspergillus nidulans	63.33	3.00e-127	445.00
IUUC-Aor-010114	Aspergillus oryzae	63.41	2.00e-130	456.00
IUUC-Ate-010285	Aspergillus terreus	62.65	2.00e-127	446.00
IUUC-Ame-011534	Astyanax mexicanus	50.46	3.00e-95	339.00
IUUC-Bgr-012121	Blumeria graminis	62.84	5.00e-124	435.00
IUUC-Bta-013143	Bos taurus	52.45	3.00e-96	342.00
IUUC-Bci-013950	Botrytis cinerea	65.24	4.00e-132	461.00
IUUC-Bdi-015019	Brachypodium distachyon	44.65	3.00e-81	293.00
IUUC-Bol-015709	Brassica oleracea	43.20	3.00e-79	287.00
IUUC-Bra-017760	Brassica rapa	43.20	1.00e-79	288.00
IUUC-Cel-018226	Caenorhabditis elegans	39.82	2.00e-71	259.00
IUUC-Cja-019741	Callithrix jacchus	52.45	3.00e-96	342.00
IUUC-Cfa-021204	Canis familiaris	52.00	4.00e-95	338.00
IUUC-Cpo-021661	Cavia porcellus	52.00	2.00e-95	339.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	42.99	4.00e-79	285.00
IUUC-Csa-024038	Chlorocebus sabaeus	52.45	3.00e-96	342.00
IUUC-Cin-025597	Ciona intestinalis	47.27	1.00e-92	330.00
IUUC-Csv-026287	Ciona savignyi	26.65	2.00e-26	110.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	62.80	2.00e-127	446.00
IUUC-Cne-026838	Cryptococcus neoformans	51.06	1.00e-104	370.00
IUUC-Cme-027304	Cyanidioschyzon merolae	43.21	3.00e-72	263.00
IUUC-Dre-028567	Danio rerio	50.76	6.00e-97	345.00
IUUC-Dno-029171	Dasypus novemcinctus	52.00	3.00e-95	340.00
IUUC-Dor-030257	Dipodomys ordii	41.38	2.00e-33	134.00
IUUC-Dse-031191	Dothistroma septosporum	57.88	1.00e-115	407.00
IUUC-Dme-031879	Drosophila melanogaster	45.68	3.00e-85	306.00
IUUC-Ete-032336	Echinops telfairi	46.30	7.00e-50	187.00
IUUC-Eca-033259	Equus caballus	52.31	2.00e-95	340.00
IUUC-Eeu-035153	Erinaceus europaeus	43.62	2.00e-28	117.00
IUUC-Fca-036489	Felis catus	52.31	2.00e-95	340.00
IUUC-Fal-037485	Ficedula albicollis	51.84	8.00e-98	347.00
IUUC-Fox-037860	Fusarium oxysporum	62.50	4.00e-127	445.00
IUUC-Fso-038188	Fusarium solani	62.80	5.00e-125	438.00
IUUC-Gmo-039311	Gadus morhua	50.00	4.00e-95	338.00
IUUC-Ggr-040045	Gaeumannomyces graminis	64.33	4.00e-133	465.00
IUUC-Gga-040645	Gallus gallus	50.90	4.00e-96	342.00
IUUC-Gac-042086	Gasterosteus aculeatus	49.85	2.00e-92	330.00
IUUC-Gma-043246	Glycine max	44.34	4.00e-81	292.00
IUUC-Ggo-045578	Gorilla gorilla	52.45	3.00e-96	342.00
IUUC-Hsa-046734	Homo sapiens	52.45	3.00e-96	342.00
IUUC-Hvu-047553	Hordeum vulgare	43.87	1.00e-80	290.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	52.00	3.00e-95	339.00
IUUC-Kpa-049325	Komagataella pastoris	54.08	2.00e-111	393.00
IUUC-Lch-049620	Latimeria chalumnae	51.00	2.00e-87	313.00
IUUC-Lpe-051338	Leersia perrieri	42.19	6.00e-76	275.00
IUUC-Loc-052094	Lepisosteus oculatus	45.05	4.00e-82	295.00
IUUC-Lma-053047	Leptosphaeria maculans	59.27	4.00e-122	428.00
IUUC-Laf-053801	Loxodonta africana	52.35	4.00e-93	332.00
IUUC-Mcc-055498	Macaca mulatta	45.40	2.00e-75	273.00
IUUC-Meu-056729	Macropus eugenii	48.93	9.00e-87	311.00
IUUC-Mor-057025	Magnaporthe oryzae	62.80	4.00e-128	448.00
IUUC-Mpo-057511	Magnaporthe poae	65.24	1.00e-133	467.00
IUUC-Mtr-058051	Medicago truncatula	45.26	3.00e-82	296.00
IUUC-Mla-059061	Melampsora laricipopulina	53.68	2.00e-105	373.00
IUUC-Mga-059229	Meleagris gallopavo	51.83	2.00e-96	343.00
IUUC-Mvi-060399	Microbotryum violaceum	54.03	6.00e-106	375.00
IUUC-Mmr-060764	Microcebus murinus	52.76	5.00e-97	345.00
IUUC-Mdo-062088	Monodelphis domestica	52.15	8.00e-95	338.00
IUUC-Mmu-064304	Mus musculus	52.15	3.00e-96	342.00
IUUC-Mac-065520	Musa acuminata	45.65	4.00e-81	292.00
IUUC-Mpu-066340	Mustela putorius furo	52.31	2.00e-95	340.00
IUUC-Mlu-067111	Myotis lucifugus	52.15	9.00e-96	341.00
IUUC-Nfi-068478	Neosartorya fischeri	63.06	5.00e-129	451.00
IUUC-Ncr-068820	Neurospora crassa	62.20	6.00e-127	444.00
IUUC-Nle-069903	Nomascus leucogenys	52.31	8.00e-96	341.00
IUUC-Opr-070221	Ochotona princeps	51.23	8.00e-94	334.00
IUUC-Ont-071765	Oreochromis niloticus	49.85	4.00e-95	339.00
IUUC-Oan-073660	Ornithorhynchus anatinus	50.00	2.00e-82	296.00
IUUC-Ocu-074039	Oryctolagus cuniculus	52.31	1.00e-95	340.00
IUUC-Oba-075395	Oryza barthii	38.65	2.00e-66	243.00
IUUC-Obr-076334	Oryza brachyantha	41.41	3.00e-74	269.00
IUUC-Ogl-077060	Oryza glaberrima	44.04	1.00e-79	287.00
IUUC-Ogu-078207	Oryza glumaepatula	44.17	4.00e-82	296.00
IUUC-Oin-079878	Oryza indica	44.17	4.00e-82	295.00
IUUC-Olo-080677	Oryza longistaminata	37.89	2.00e-73	267.00
IUUC-Ome-081228	Oryza meridionalis	35.17	1.00e-36	144.00
IUUC-Oni-082411	Oryza nivara	38.60	6.00e-65	238.00
IUUC-Opu-083136	Oryza punctata	44.17	2.00e-82	296.00
IUUC-Oru-084916	Oryza rufipogon	42.90	5.00e-80	288.00
IUUC-Osa-085776	Oryza sativa	44.17	4.00e-82	295.00
IUUC-Ola-087053	Oryzias latipes	51.38	1.00e-97	347.00
IUUC-Olu-087602	Ostreococcus lucimarinus	43.83	9.00e-86	307.00
IUUC-Oga-088154	Otolemur garnettii	52.31	1.00e-95	340.00
IUUC-Oar-089915	Ovis aries	52.31	2.00e-95	340.00
IUUC-Ptr-091124	Pan troglodytes	44.31	1.00e-70	257.00
IUUC-Pan-092035	Papio anubis	52.45	3.00e-96	342.00
IUUC-Psi-094096	Pelodiscus sinensis	50.70	1.00e-59	220.00
IUUC-Pma-094255	Petromyzon marinus	28.89	8.00e-24	102.00
IUUC-Pno-094988	Phaeosphaeria nodorum	55.32	6.00e-105	371.00
IUUC-Ppa-095949	Physcomitrella patens	44.21	8.00e-83	298.00
IUUC-Pfo-096101	Poecilia formosa	51.07	4.00e-97	345.00
IUUC-Pab-097726	Pongo abelii	52.45	3.00e-96	342.00
IUUC-Pop-099617	Populus trichocarpa	44.95	3.00e-81	292.00
IUUC-Pca-101014	Procavia capensis	52.45	2.00e-96	343.00
IUUC-Ppe-101320	Prunus persica	43.73	3.00e-81	293.00
IUUC-Pva-102789	Pteropus vampyrus	47.24	1.00e-82	297.00
IUUC-Pgr-103479	Puccinia graminis	55.52	1.00e-107	380.00
IUUC-Ptt-103981	Puccinia triticina	54.60	4.00e-106	375.00
IUUC-Pte-104278	Pyrenophora teres	58.66	4.00e-118	415.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	58.66	4.00e-118	415.00
IUUC-Rno-105867	Rattus norvegicus	47.06	6.00e-78	281.00
IUUC-Sce-106251	Saccharomyces cerevisiae	52.24	2.00e-106	377.00
IUUC-Sha-107039	Sarcophilus harrisii	51.99	5.00e-95	338.00
IUUC-Spo-108314	Schizosaccharomyces pombe	79.88	1.00e-163	566.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	65.24	5.00e-132	461.00
IUUC-Smo-108728	Selaginella moellendorffii	44.17	3.00e-82	296.00
IUUC-Sit-110801	Setaria italica	44.38	1.00e-82	297.00
IUUC-Sly-111326	Solanum lycopersicum	46.50	3.00e-85	306.00
IUUC-Stu-112458	Solanum tuberosum	47.11	2.00e-85	307.00
IUUC-Sbi-114063	Sorghum bicolor	45.57	6.00e-83	298.00
IUUC-Sre-115096	Sporisorium reilianum	52.68	1.00e-100	357.00
IUUC-Ssc-116080	Sus scrofa	52.45	3.00e-96	342.00
IUUC-Tgu-116988	Taeniopygia guttata	51.69	3.00e-97	346.00
IUUC-Tru-118766	Takifugu rubripes	51.07	4.00e-97	345.00
IUUC-Tsy-119522	Tarsius syrichta	28.03	7.00e-18	82.40
IUUC-Tni-120197	Tetraodon nigroviridis	50.76	1.00e-96	344.00
IUUC-Tca-121316	Theobroma cacao	45.87	2.00e-83	300.00
IUUC-Tre-122097	Trichoderma reesei	62.50	3.00e-126	442.00
IUUC-Tvi-122442	Trichoderma virens	62.50	2.00e-126	443.00
IUUC-Tae-125542	Triticum aestivum	43.43	2.00e-80	290.00
IUUC-Tur-126334	Triticum urartu	38.30	7.00e-61	225.00
IUUC-Tme-127038	Tuber melanosporum	67.07	3.00e-137	479.00
IUUC-Ttr-128659	Tursiops truncatus	49.69	1.00e-78	284.00
IUUC-Uma-129464	Ustilago maydis	52.82	1.00e-100	357.00
IUUC-Vda-129841	Verticillium dahliae	64.02	4.00e-130	455.00
IUUC-Vpa-130382	Vicugna pacos	28.89	3.00e-23	100.00
IUUC-Vvi-131076	Vitis vinifera	46.18	2.00e-83	300.00
IUUC-Xtr-132395	Xenopus tropicalis	53.05	1.00e-99	354.00
IUUC-Xma-133383	Xiphophorus maculatus	51.07	4.00e-97	345.00
IUUC-Yli-134586	Yarrowia lipolytica	55.76	6.00e-105	371.00
IUUC-Zma-135904	Zea mays	45.29	6.00e-83	298.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence