iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/Other	28.40	4.50e-01	31.20	IUUC-Sce-106175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MNLLISMFIL ILAAGEGEII PSMEESVVTN FVKSLVKTKQ AIVFSCLFKD FKEISLALMR 60
INQFVSVVNL NQSYSLTSIL TRENYARTSV MVNARCSGSS ELLFEASENR YFNKTYQWFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAATCAAA GCTACACTTT AAATCAATTA AATTATTTCT GATTAGAGGG TATAGAAGCT 60
GCATAGTAAA TTATGAACCA ATTGAAATTA GAATGGGTAA TTAGCACCTG CAATTCATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0675--Receptor
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001320--Iontro_rcpt

Pfam

PF00060--Lig_chan

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004970--F:ionotropic glutamate receptor activity
GO:0015276--F:ligand-gated ion channel activity
GO:0050907--P:detection of chemical stimulus involved in sensory perception
GO:0019233--P:sensory perception of pain

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ppa-095921	Physcomitrella patens	46.34	2.30e-02	33.50
IUUC-Sce-106175	Saccharomyces cerevisiae	28.40	1.30e-01	31.60
IUUC-Sar-113440	Sorex araneus	30.30	4.60e+00	27.30
IUUC-Sbi-114177	Sorghum bicolor	45.00	6.60e-01	26.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence