iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097763

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat-containing protein 6

Genbank Nucleotide ID

ABGA01324602

Gene Name

WDR6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000013887.2	ENSPPYT00000016153.2	ENSPPYP00000015535.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-20	71.6	237	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH + ++++++  s +ll+++s D ++++W + +
   Q: 237  GHVGIIFSMSYleSKGLLATASEDRSVRIWKVGD 270
           899*******99766***************9865 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MGCAARREGS FSREFSSLLS RSCLSTSRID MDALEDYVWP RATSELILLP VTGLECVGDR 60
LLAGEGPDVL VYSLDFGGHL RMIKRVQNLL GHYLIHGFRI RPEPNGDLDL EAMVAVFGSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTACATGACA GTGCTGTTTT ATTTGAACAA CGTCACTGGT GGGGGCGAGA CTGTTTTCCC 60
TGTAGCAGAT AACAGAACCT ACGATGAAAT GGTAAGGGTC AACTGGGCTA TTACTCTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005886--C:plasma membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	22.01	5.00e-19	90.50
IUUC-Aml-001786	Ailuropoda melanoleuca	93.33	0.00e+00	2060.00
IUUC-Atr-003053	Amborella trichopoda	21.26	9.00e-29	122.00
IUUC-Apl-003178	Anas platyrhynchos	47.43	5.00e-139	487.00
IUUC-Aca-004886	Anolis carolinensis	44.45	0.00e+00	845.00
IUUC-Aly-005509	Arabidopsis lyrata	24.17	3.00e-39	157.00
IUUC-Ath-007109	Arabidopsis thaliana	27.05	5.00e-28	120.00
IUUC-Ago-007817	Ashbya gossypii	22.49	1.00e-42	168.00
IUUC-Acl-008020	Aspergillus clavatus	23.32	1.00e-16	82.40
IUUC-Afl-008608	Aspergillus flavus	21.65	5.00e-16	79.70
IUUC-Afu-009035	Aspergillus fumigatus	22.18	2.00e-28	121.00
IUUC-Ani-009359	Aspergillus nidulans	23.52	3.00e-24	107.00
IUUC-Ang-009692	Aspergillus niger	26.47	5.00e-11	63.90
IUUC-Aor-010056	Aspergillus oryzae	22.19	2.00e-27	118.00
IUUC-Ate-010299	Aspergillus terreus	21.79	6.00e-28	119.00
IUUC-Ame-011051	Astyanax mexicanus	33.39	4.00e-146	512.00
IUUC-Bgr-012077	Blumeria graminis	21.46	2.00e-11	65.10
IUUC-Bta-012793	Bos taurus	89.53	0.00e+00	1956.00
IUUC-Bci-013679	Botrytis cinerea	21.12	1.00e-09	59.30
IUUC-Bdi-014401	Brachypodium distachyon	23.03	1.00e-32	135.00
IUUC-Bol-015628	Brassica oleracea	23.44	7.00e-29	123.00
IUUC-Bra-017446	Brassica rapa	23.48	4.00e-32	134.00
IUUC-Cja-018910	Callithrix jacchus	96.26	0.00e+00	2117.00
IUUC-Cfa-021260	Canis familiaris	93.31	0.00e+00	2066.00
IUUC-Cpo-022205	Cavia porcellus	87.02	0.00e+00	1980.00
IUUC-Csa-023510	Chlorocebus sabaeus	97.57	0.00e+00	2127.00
IUUC-Cgl-026380	Colletotrichum gloeosporioides	26.54	5.00e-10	59.70
IUUC-Dre-028004	Danio rerio	34.08	3.00e-156	546.00
IUUC-Dno-029804	Dasypus novemcinctus	85.85	0.00e+00	1883.00
IUUC-Dor-030512	Dipodomys ordii	82.28	0.00e+00	1473.00
IUUC-Dme-032047	Drosophila melanogaster	22.73	7.00e-29	122.00
IUUC-Ete-033076	Echinops telfairi	82.81	0.00e+00	696.00
IUUC-Eca-033727	Equus caballus	93.27	0.00e+00	1646.00
IUUC-Eeu-035210	Erinaceus europaeus	84.21	0.00e+00	1908.00
IUUC-Fca-035433	Felis catus	92.96	0.00e+00	2062.00
IUUC-Fal-036807	Ficedula albicollis	45.90	9.00e-160	556.00
IUUC-Fox-037749	Fusarium oxysporum	22.44	3.00e-16	80.90
IUUC-Fso-038164	Fusarium solani	25.19	7.00e-11	63.20
IUUC-Gmo-039180	Gadus morhua	35.84	3.00e-141	496.00
IUUC-Gga-040482	Gallus gallus	43.52	3.00e-173	602.00
IUUC-Gac-042066	Gasterosteus aculeatus	35.82	1.00e-153	537.00
IUUC-Gma-042704	Glycine max	25.00	2.00e-22	102.00
IUUC-Ggo-044942	Gorilla gorilla	98.61	0.00e+00	2124.00
IUUC-Hsa-046408	Homo sapiens	98.96	0.00e+00	2166.00
IUUC-Hvu-047448	Hordeum vulgare	21.85	4.00e-24	107.00
IUUC-Itr-048756	Ictidomys tridecemlineatus	91.88	0.00e+00	2071.00
IUUC-Kpa-049257	Komagataella pastoris	21.40	5.00e-38	153.00
IUUC-Lch-050170	Latimeria chalumnae	41.61	0.00e+00	854.00
IUUC-Lpe-051575	Leersia perrieri	21.27	7.00e-31	129.00
IUUC-Loc-052341	Lepisosteus oculatus	35.27	6.00e-133	468.00
IUUC-Lma-053318	Leptosphaeria maculans	23.63	4.00e-12	67.40
IUUC-Laf-054299	Loxodonta africana	87.28	0.00e+00	1910.00
IUUC-Mcc-055438	Macaca mulatta	97.95	0.00e+00	2117.00
IUUC-Meu-056206	Macropus eugenii	47.35	0.00e+00	644.00
IUUC-Mor-056928	Magnaporthe oryzae	23.16	9.00e-16	79.70
IUUC-Mtr-058455	Medicago truncatula	23.44	2.00e-28	122.00
IUUC-Mga-059962	Meleagris gallopavo	46.24	3.00e-149	521.00
IUUC-Mvi-060438	Microbotryum violaceum	26.39	6.00e-16	80.10
IUUC-Mmr-061353	Microcebus murinus	93.67	0.00e+00	2088.00
IUUC-Mdo-062061	Monodelphis domestica	50.11	0.00e+00	895.00
IUUC-Mmu-064386	Mus musculus	86.40	0.00e+00	1956.00
IUUC-Mac-065653	Musa acuminata	22.82	1.00e-42	168.00
IUUC-Mpu-066420	Mustela putorius furo	92.42	0.00e+00	2075.00
IUUC-Mlu-068104	Myotis lucifugus	87.60	0.00e+00	1959.00
IUUC-Nfi-068301	Neosartorya fischeri	21.84	7.00e-28	119.00
IUUC-Ncr-068718	Neurospora crassa	21.74	8.00e-13	69.70
IUUC-Nle-069836	Nomascus leucogenys	87.53	0.00e+00	1592.00
IUUC-Ont-071605	Oreochromis niloticus	35.67	5.00e-163	568.00
IUUC-Oan-073645	Ornithorhynchus anatinus	48.15	0.00e+00	984.00
IUUC-Ocu-074708	Oryctolagus cuniculus	88.52	0.00e+00	1933.00
IUUC-Oba-075290	Oryza barthii	26.30	3.00e-21	98.20
IUUC-Obr-076647	Oryza brachyantha	22.07	2.00e-29	124.00
IUUC-Ogl-077628	Oryza glaberrima	27.68	4.00e-27	117.00
IUUC-Ogu-078209	Oryza glumaepatula	25.69	3.00e-21	97.80
IUUC-Oin-079342	Oryza indica	27.22	5.00e-28	120.00
IUUC-Olo-080334	Oryza longistaminata	26.83	3.00e-21	98.60
IUUC-Ome-081776	Oryza meridionalis	24.68	3.00e-21	97.80
IUUC-Oni-082311	Oryza nivara	27.22	6.00e-28	120.00
IUUC-Opu-083195	Oryza punctata	21.29	4.00e-28	120.00
IUUC-Oru-085006	Oryza rufipogon	25.99	1.00e-20	95.90
IUUC-Osa-085317	Oryza sativa	27.38	1.00e-26	115.00
IUUC-Ola-087145	Oryzias latipes	35.52	2.00e-142	500.00
IUUC-Olu-087785	Ostreococcus lucimarinus	25.00	1.00e-10	62.40
IUUC-Oga-088206	Otolemur garnettii	92.95	0.00e+00	2109.00
IUUC-Oar-089802	Ovis aries	88.51	0.00e+00	1929.00
IUUC-Ptr-091528	Pan troglodytes	90.27	0.00e+00	1924.00
IUUC-Pan-092782	Papio anubis	98.04	0.00e+00	2124.00
IUUC-Psi-093102	Pelodiscus sinensis	48.35	4.00e-134	471.00
IUUC-Ppa-095436	Physcomitrella patens	22.48	2.00e-34	141.00
IUUC-Pfo-097423	Poecilia formosa	34.14	4.00e-146	512.00
IUUC-Pop-099090	Populus trichocarpa	26.84	4.00e-24	107.00
IUUC-Pca-100173	Procavia capensis	84.62	0.00e+00	1892.00
IUUC-Ppe-101580	Prunus persica	24.68	3.00e-32	134.00
IUUC-Pva-102715	Pteropus vampyrus	91.64	0.00e+00	2006.00
IUUC-Pgr-103424	Puccinia graminis	24.63	3.00e-13	70.90
IUUC-Pte-104316	Pyrenophora teres	22.48	2.00e-10	62.00
IUUC-Pyt-104676	Pyrenophora triticirepentis	22.25	8.00e-10	59.70
IUUC-Rno-105122	Rattus norvegicus	88.27	0.00e+00	2007.00
IUUC-Sce-106465	Saccharomyces cerevisiae	20.00	4.00e-25	110.00
IUUC-Sha-107208	Sarcophilus harrisii	48.41	0.00e+00	1009.00
IUUC-Sja-107771	Schizosaccharomyces japonicus	22.84	1.00e-20	95.50
IUUC-Spo-108272	Schizosaccharomyces pombe	22.14	4.00e-21	97.10
IUUC-Smo-108961	Selaginella moellendorffii	23.32	3.00e-40	161.00
IUUC-Sit-109932	Setaria italica	22.03	7.00e-34	139.00
IUUC-Sly-111685	Solanum lycopersicum	24.52	4.00e-35	144.00
IUUC-Sar-112998	Sorex araneus	87.25	0.00e+00	1977.00
IUUC-Sbi-114074	Sorghum bicolor	21.67	5.00e-35	143.00
IUUC-Ssc-115619	Sus scrofa	91.92	0.00e+00	985.00
IUUC-Tgu-117485	Taeniopygia guttata	46.08	1.00e-153	536.00
IUUC-Tru-118104	Takifugu rubripes	35.81	3.00e-159	556.00
IUUC-Tni-119995	Tetraodon nigroviridis	36.54	7.00e-154	538.00
IUUC-Tca-121790	Theobroma cacao	28.06	6.00e-26	113.00
IUUC-Tre-122080	Trichoderma reesei	21.90	2.00e-14	75.10
IUUC-Tvi-122306	Trichoderma virens	22.03	8.00e-15	76.30
IUUC-Tae-125371	Triticum aestivum	22.81	1.00e-34	142.00
IUUC-Tur-126787	Triticum urartu	22.63	5.00e-31	130.00
IUUC-Tbe-128082	Tupaia belangeri	92.36	1.00e-156	546.00
IUUC-Ttr-128387	Tursiops truncatus	92.11	0.00e+00	1006.00
IUUC-Vda-129804	Verticillium dahliae	21.86	6.00e-14	73.60
IUUC-Vpa-130257	Vicugna pacos	91.09	4.00e-165	574.00
IUUC-Vvi-131701	Vitis vinifera	28.83	6.00e-28	120.00
IUUC-Xtr-132622	Xenopus tropicalis	42.08	0.00e+00	855.00
IUUC-Xma-134014	Xiphophorus maculatus	35.57	4.00e-153	535.00
IUUC-Yli-134589	Yarrowia lipolytica	21.81	7.00e-24	106.00
IUUC-Zma-135732	Zea mays	21.35	1.00e-36	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence