iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017045

Ensembl Protein ID

Bra009770.1-P

UniProt Accession

A5HB99; A5HB99_BRARP

Genbank Protein ID

ABQ10570.1; ABQ10571.1

Protein Name

WD-like protein

Genbank Nucleotide ID

EF434562; EF434563

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra009770	Bra009770.1	Bra009770.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-16	60.9	170	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++++Dlr+
   Q: 170  HDKEVHDIAWGEaRVFASVSADGSVRIFDLRD 201
           8899******55689**************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDNSAPDSLP RSETAVTYDS PYPLYAMSFS SSTHRIAVGS FLEDYNNRID ILSFDSDSMS 60
LKPLPSLSFE HPYPPTKLMF SPPSLRRSGG GDLLASSGDF LRLWEVNEDS SSAEPVSVLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAACT CAGCTCCGGA CTCCTTACCT AGATCGGAAA CCGCCGTCAC CTACGACTCT 60
CCTTACCCCC TCTACGCGAT GTCCTTCTCC TCCTCCACCC ACCGAATCGC CGTCGGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	64.55	4.00e-37	145.00
IUUC-Aly-006211	Arabidopsis lyrata	92.38	0.00e+00	649.00
IUUC-Ath-006884	Arabidopsis thaliana	92.96	0.00e+00	654.00
IUUC-Ago-007732	Ashbya gossypii	30.65	8.00e-39	154.00
IUUC-Acl-008299	Aspergillus clavatus	36.87	1.00e-44	174.00
IUUC-Afl-008470	Aspergillus flavus	35.41	1.00e-40	160.00
IUUC-Afu-008896	Aspergillus fumigatus	34.56	9.00e-41	161.00
IUUC-Ani-009375	Aspergillus nidulans	34.42	7.00e-42	164.00
IUUC-Ang-009687	Aspergillus niger	35.38	8.00e-47	181.00
IUUC-Aor-010198	Aspergillus oryzae	34.92	3.00e-40	159.00
IUUC-Ate-010363	Aspergillus terreus	35.83	5.00e-38	152.00
IUUC-Bgr-012055	Blumeria graminis	35.85	3.00e-45	176.00
IUUC-Bci-013840	Botrytis cinerea	36.61	9.00e-49	187.00
IUUC-Bdi-014944	Brachypodium distachyon	63.16	3.00e-123	434.00
IUUC-Bol-015620	Brassica oleracea	99.41	0.00e+00	650.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	39.27	3.00e-48	186.00
IUUC-Cne-026871	Cryptococcus neoformans	31.73	1.00e-46	180.00
IUUC-Cme-027345	Cyanidioschyzon merolae	37.65	2.00e-53	202.00
IUUC-Dse-031207	Dothistroma septosporum	36.52	6.00e-40	158.00
IUUC-Fox-037852	Fusarium oxysporum	37.53	5.00e-52	198.00
IUUC-Fso-038173	Fusarium solani	35.82	4.00e-51	195.00
IUUC-Ggr-040072	Gaeumannomyces graminis	36.50	8.00e-49	187.00
IUUC-Gma-043012	Glycine max	76.63	2.00e-154	538.00
IUUC-Hvu-047639	Hordeum vulgare	64.58	9.00e-121	426.00
IUUC-Kpa-049347	Komagataella pastoris	32.13	7.00e-45	174.00
IUUC-Lpe-051336	Leersia perrieri	63.88	1.00e-121	429.00
IUUC-Lma-053005	Leptosphaeria maculans	39.05	6.00e-44	172.00
IUUC-Meu-056685	Macropus eugenii	45.40	7.00e-67	246.00
IUUC-Mor-057075	Magnaporthe oryzae	35.86	1.00e-43	170.00
IUUC-Mpo-057336	Magnaporthe poae	36.07	4.00e-48	185.00
IUUC-Mtr-058793	Medicago truncatula	78.55	6.00e-158	549.00
IUUC-Mvi-060379	Microbotryum violaceum	37.72	1.00e-40	160.00
IUUC-Mac-065344	Musa acuminata	59.48	9.00e-111	392.00
IUUC-Nfi-068302	Neosartorya fischeri	34.09	3.00e-43	169.00
IUUC-Ncr-068642	Neurospora crassa	36.00	4.00e-49	189.00
IUUC-Oba-075455	Oryza barthii	60.96	1.00e-113	402.00
IUUC-Obr-076064	Oryza brachyantha	63.31	1.00e-116	412.00
IUUC-Ogl-077224	Oryza glaberrima	60.96	1.00e-113	402.00
IUUC-Ogu-078639	Oryza glumaepatula	60.66	9.00e-113	399.00
IUUC-Oin-080194	Oryza indica	60.96	1.00e-113	402.00
IUUC-Olo-080234	Oryza longistaminata	60.66	3.00e-113	400.00
IUUC-Oni-082021	Oryza nivara	60.96	1.00e-113	402.00
IUUC-Opu-083903	Oryza punctata	60.30	2.00e-113	402.00
IUUC-Oru-084738	Oryza rufipogon	60.96	1.00e-113	402.00
IUUC-Osa-085445	Oryza sativa	60.96	1.00e-113	402.00
IUUC-Pno-094967	Phaeosphaeria nodorum	39.07	5.00e-44	172.00
IUUC-Pop-099260	Populus trichocarpa	79.88	1.00e-162	565.00
IUUC-Ppe-101664	Prunus persica	78.78	2.00e-162	564.00
IUUC-Pte-104094	Pyrenophora teres	39.53	6.00e-44	172.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	39.53	1.00e-43	171.00
IUUC-Sce-106252	Saccharomyces cerevisiae	31.97	2.00e-44	172.00
IUUC-Spo-108014	Schizosaccharomyces pombe	36.99	3.00e-48	185.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	35.63	2.00e-48	187.00
IUUC-Sly-111838	Solanum lycopersicum	75.58	2.00e-157	547.00
IUUC-Stu-112456	Solanum tuberosum	75.58	5.00e-157	546.00
IUUC-Sar-113705	Sorex araneus	44.48	3.00e-67	248.00
IUUC-Sbi-113984	Sorghum bicolor	63.48	1.00e-102	365.00
IUUC-Sre-114968	Sporisorium reilianum	38.50	3.00e-53	202.00
IUUC-Tca-121493	Theobroma cacao	77.39	5.00e-153	533.00
IUUC-Tre-121987	Trichoderma reesei	37.82	4.00e-51	195.00
IUUC-Tvi-122586	Trichoderma virens	36.76	3.00e-51	196.00
IUUC-Tae-125936	Triticum aestivum	64.88	3.00e-121	427.00
IUUC-Tme-126973	Tuber melanosporum	38.27	2.00e-42	167.00
IUUC-Uma-129362	Ustilago maydis	39.04	7.00e-54	204.00
IUUC-Vda-130025	Verticillium dahliae	38.86	8.00e-49	187.00
IUUC-Vvi-131483	Vitis vinifera	76.25	3.00e-154	536.00
IUUC-Yli-134419	Yarrowia lipolytica	40.06	2.00e-58	219.00
IUUC-Zma-135276	Zea mays	63.28	2.00e-119	421.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence