iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114401

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G378500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g035920	Sb01g035920.1	Sb01g035920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	35.4	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++ dg   ++lp CgH fh  C+ +w       + + +CPlCr
   Q: 102  CAVCLAEIGDGetGRLLPgCGHRFHVACIDRW------FRANSTCPLCR 144
           ********55444777788*************......999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MESSSSSSLD SNLRFDLYAV LVGLGLAGFL AVCFWRLYKL TVSARPQDMM PTATATATTS 60
DAGRLKTGAL RQQDVAALPV FVVRGRGAGA DDGCAAAPSV ECAVCLAEIG DGETGRLLPG 120

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Nucleotide Sequence
(Fasta)

ATGGAGTCGT CGTCGTCGTC GTCTTTGGAC AGCAACCTCA GGTTCGACTT GTACGCGGTG 60
CTGGTGGGGC TCGGCCTCGC GGGCTTCCTC GCGGTGTGCT TCTGGCGCCT GTACAAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g035920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007829	Ashbya gossypii	45.28	4.00e-09	54.70
IUUC-Bdi-015015	Brachypodium distachyon	60.67	9.00e-37	145.00
IUUC-Obr-076402	Oryza brachyantha	54.34	8.00e-28	115.00
IUUC-Ogu-078518	Oryza glumaepatula	55.88	2.00e-23	100.00
IUUC-Ome-081971	Oryza meridionalis	58.09	3.00e-25	107.00
IUUC-Oni-082229	Oryza nivara	58.09	7.00e-24	102.00
IUUC-Opu-083364	Oryza punctata	63.39	8.00e-30	121.00
IUUC-Oru-084646	Oryza rufipogon	56.62	5.00e-23	99.40
IUUC-Sce-106307	Saccharomyces cerevisiae	42.62	2.00e-08	52.40
IUUC-Tae-124226	Triticum aestivum	55.62	2.00e-40	157.00
IUUC-Tur-126816	Triticum urartu	58.67	3.00e-40	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence