iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006250

Ensembl Protein ID

Al_scaffold_0001_5170

UniProt Accession

D7KAZ1; D7KAZ1_ARALL

Genbank Protein ID

EFH68209.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_682847

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0001_5170	Al_scaffold_0001_5170	Al_scaffold_0001_5170

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	28.71	3.00e-03	38.50	IUUC-Sce-106248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGLDSEEEAE LVVIKDEKAE ANTVCLHSFS DLTYVSPVVF LYLLKECYKH GSLKATKKFQ 60
ALQYRVHQVL ANKPQPGPAT FIIKCLTVLP MFGVYGEGFS HLVISALRRF FKSVSEPTTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTGG ATTCTGAAGA AGAAGCTGAG TTGGTGGTAA TAAAAGATGA GAAAGCTGAA 60
GCAAACACTG TGTGTTTACA TTCATTTTCA GATTTAACTT ATGTGTCTCC TGTTGTGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002562--3'-5'_exonuclease_dom
IPR012337--RNaseH-like_dom

Pfam

PF01612--DNA_pol_A_exo1

SMART

SM00474--35EXOc

Gene Ontology

GO:0008408--F:3'-5' exonuclease activity
GO:0003676--F:nucleic acid binding

KEGG

aly:ARALYDRAFT_682847

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004111	Anas platyrhynchos	33.33	8.10e-01	29.60
IUUC-Aca-004885	Anolis carolinensis	41.67	2.20e+00	28.50
IUUC-Dno-029612	Dasypus novemcinctus	34.21	2.00e+00	28.50
IUUC-Eeu-034733	Erinaceus europaeus	34.15	1.30e+00	28.90
IUUC-Fal-037265	Ficedula albicollis	33.33	7.90e-01	30.00
IUUC-Gmo-039582	Gadus morhua	27.96	3.50e-01	28.10
IUUC-Gga-040814	Gallus gallus	41.67	2.00e+00	28.50
IUUC-Lch-049566	Latimeria chalumnae	33.33	1.80e+00	28.90
IUUC-Loc-052514	Lepisosteus oculatus	41.67	4.90e+00	27.30
IUUC-Meu-056687	Macropus eugenii	34.21	1.20e+00	29.30
IUUC-Opr-071025	Ochotona princeps	41.67	4.00e+00	27.30
IUUC-Psi-093606	Pelodiscus sinensis	34.21	1.60e+00	28.90
IUUC-Pca-101045	Procavia capensis	34.21	2.10e+00	28.50
IUUC-Ptt-103987	Puccinia triticina	27.08	1.20e+00	25.80
IUUC-Sce-106248	Saccharomyces cerevisiae	28.71	2.00e-03	38.50
IUUC-Sha-107121	Sarcophilus harrisii	34.21	1.40e+00	29.30
IUUC-Sre-115007	Sporisorium reilianum	28.31	1.00e-07	51.20
IUUC-Tgu-116455	Taeniopygia guttata	33.33	7.30e-01	30.00
IUUC-Vpa-130325	Vicugna pacos	41.67	3.20e+00	27.70
IUUC-Xtr-132777	Xenopus tropicalis	44.00	4.80e-01	30.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence