iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-134929

UUCD1 version

UUC-ZeM-01200

Ensembl Protein ID

Zm00001d000074_T002

UniProt Accession

B6STM0; B6STM0_MAIZE

Genbank Protein ID

ACG28203.1; ACN32149.1

Protein Name

Pre-mRNA-splicing factor PRP17

Genbank Nucleotide ID

EU956085; BT066273

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d000074	Zm00001d000074_T002	Zm00001d000074_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-26	90.7	146	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gHt  ++c+++ ++  +ll+s++ D+t++vW++
   Q: 146  GHTKAINCVDWsPThgHLLASAGMDHTVHVWNV 178
           8***********4446889************96 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDLLSAAYGA TSDDEDAADR PFSMPVATRS ASFSPPPMKP PRWESHPYLP PTHCFPQPPL 60
PDAALPLASP SSGRYISKRE RALLASSGAH IESGSSLPLT RVDFESAVGS ITYPNLRADI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACGCAGGG AATACTTGAA ACCCCGGCTC CCGATGGATC ATGGATCTCC TCTCTGCTGC 60
GTACGGTGCT ACCTCTGACG ATGAGGATGC CGCGGACCGA CCCTTCTCCA TGCCGGTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

zma:100281243

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000454	Aegilops tauschii	55.28	1.00e-75	277.00
IUUC-Aml-001588	Ailuropoda melanoleuca	38.02	7.00e-64	237.00
IUUC-Atr-003155	Amborella trichopoda	52.18	2.00e-122	431.00
IUUC-Apl-003544	Anas platyrhynchos	43.60	4.00e-57	213.00
IUUC-Aly-006510	Arabidopsis lyrata	54.11	7.00e-120	423.00
IUUC-Ath-007329	Arabidopsis thaliana	55.05	1.00e-122	432.00
IUUC-Ame-010607	Astyanax mexicanus	43.18	4.00e-51	193.00
IUUC-Bta-013542	Bos taurus	36.74	2.00e-61	229.00
IUUC-Bdi-014736	Brachypodium distachyon	71.59	7.00e-178	616.00
IUUC-Bol-016112	Brassica oleracea	50.00	1.00e-121	429.00
IUUC-Bra-016685	Brassica rapa	49.45	5.00e-120	424.00
IUUC-Cja-018883	Callithrix jacchus	38.34	9.00e-65	240.00
IUUC-Cfa-021278	Canis familiaris	37.70	2.00e-63	236.00
IUUC-Cpo-022449	Cavia porcellus	36.91	1.00e-60	226.00
IUUC-Csa-023916	Chlorocebus sabaeus	38.02	9.00e-65	240.00
IUUC-Cin-025210	Ciona intestinalis	32.57	5.00e-39	153.00
IUUC-Csv-026371	Ciona savignyi	29.46	6.00e-33	134.00
IUUC-Eca-033484	Equus caballus	38.17	3.00e-63	235.00
IUUC-Fca-035673	Felis catus	37.85	2.00e-63	236.00
IUUC-Fal-036795	Ficedula albicollis	40.13	2.00e-73	268.00
IUUC-Gmo-039062	Gadus morhua	37.64	1.00e-52	199.00
IUUC-Gga-040773	Gallus gallus	40.79	3.00e-66	244.00
IUUC-Gac-042364	Gasterosteus aculeatus	40.07	3.00e-59	221.00
IUUC-Gma-043100	Glycine max	51.79	4.00e-122	431.00
IUUC-Ggo-045220	Gorilla gorilla	38.02	8.00e-65	240.00
IUUC-Hsa-046511	Homo sapiens	38.02	1.00e-64	240.00
IUUC-Hvu-047431	Hordeum vulgare	78.82	2.00e-165	574.00
IUUC-Lch-049590	Latimeria chalumnae	41.39	8.00e-66	243.00
IUUC-Lpe-050810	Leersia perrieri	82.22	4.00e-124	437.00
IUUC-Loc-052196	Lepisosteus oculatus	41.14	6.00e-73	267.00
IUUC-Mcc-055622	Macaca mulatta	38.02	2.00e-64	239.00
IUUC-Mtr-058041	Medicago truncatula	62.50	3.00e-115	407.00
IUUC-Mga-060149	Meleagris gallopavo	43.06	2.00e-57	214.00
IUUC-Mmr-061552	Microcebus murinus	38.66	2.00e-64	239.00
IUUC-Mdo-061969	Monodelphis domestica	40.63	4.00e-71	261.00
IUUC-Mmu-063343	Mus musculus	37.70	2.00e-62	233.00
IUUC-Mac-065079	Musa acuminata	55.70	3.00e-123	434.00
IUUC-Mpu-065949	Mustela putorius furo	38.10	3.00e-47	182.00
IUUC-Mlu-067523	Myotis lucifugus	37.93	1.00e-44	173.00
IUUC-Ont-072361	Oreochromis niloticus	39.15	8.00e-70	257.00
IUUC-Oba-075367	Oryza barthii	71.33	5.00e-164	570.00
IUUC-Obr-076738	Oryza brachyantha	73.50	3.00e-170	590.00
IUUC-Ogu-078590	Oryza glumaepatula	71.10	1.00e-163	568.00
IUUC-Oin-079678	Oryza indica	71.62	5.00e-172	596.00
IUUC-Olo-080453	Oryza longistaminata	81.59	4.00e-140	489.00
IUUC-Ome-081794	Oryza meridionalis	70.23	2.00e-139	488.00
IUUC-Oni-082432	Oryza nivara	71.40	2.00e-171	595.00
IUUC-Opu-083897	Oryza punctata	77.06	4.00e-168	583.00
IUUC-Oru-085068	Oryza rufipogon	69.57	2.00e-161	561.00
IUUC-Osa-085805	Oryza sativa	71.18	2.00e-171	594.00
IUUC-Ola-087567	Oryzias latipes	41.26	6.00e-60	223.00
IUUC-Oga-088168	Otolemur garnettii	38.02	7.00e-64	237.00
IUUC-Oar-090158	Ovis aries	35.78	2.00e-54	206.00
IUUC-Ptr-090913	Pan troglodytes	30.99	9.00e-46	177.00
IUUC-Pan-092157	Papio anubis	38.02	8.00e-65	240.00
IUUC-Psi-093817	Pelodiscus sinensis	40.96	2.00e-64	238.00
IUUC-Pma-094263	Petromyzon marinus	41.44	8.00e-39	152.00
IUUC-Ppa-095302	Physcomitrella patens	46.28	2.00e-99	355.00
IUUC-Pfo-097526	Poecilia formosa	41.90	4.00e-70	258.00
IUUC-Pab-098152	Pongo abelii	38.55	2.00e-54	206.00
IUUC-Pop-099987	Populus trichocarpa	55.94	6.00e-122	429.00
IUUC-Ppe-101575	Prunus persica	52.12	9.00e-126	442.00
IUUC-Pva-102942	Pteropus vampyrus	38.61	7.00e-65	241.00
IUUC-Rno-104857	Rattus norvegicus	37.70	2.00e-62	233.00
IUUC-Sha-106763	Sarcophilus harrisii	39.37	1.00e-70	259.00
IUUC-Sit-110488	Setaria italica	82.06	0.00e+00	672.00
IUUC-Sly-110893	Solanum lycopersicum	51.35	4.00e-115	407.00
IUUC-Stu-112566	Solanum tuberosum	51.57	4.00e-115	407.00
IUUC-Sar-113617	Sorex araneus	29.57	1.00e-29	124.00
IUUC-Sbi-114566	Sorghum bicolor	89.69	0.00e+00	801.00
IUUC-Tgu-117015	Taeniopygia guttata	40.13	4.00e-73	267.00
IUUC-Tsy-119467	Tarsius syrichta	35.05	8.00e-34	137.00
IUUC-Tca-121587	Theobroma cacao	55.91	3.00e-123	434.00
IUUC-Tae-123988	Triticum aestivum	79.68	2.00e-169	587.00
IUUC-Tur-126075	Triticum urartu	75.72	1.00e-71	262.00
IUUC-Tbe-127502	Tupaia belangeri	30.67	6.00e-41	161.00
IUUC-Ttr-129033	Tursiops truncatus	34.95	1.00e-63	237.00
IUUC-Vvi-131505	Vitis vinifera	57.33	2.00e-124	438.00
IUUC-Xtr-132851	Xenopus tropicalis	38.76	3.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence