iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112119

Ensembl Protein ID

PGSC0003DMT400043948

UniProt Accession

M1BFE6; M1BFE6_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400017055	PGSC0003DMT400043945	PGSC0003DMT400043945
PGSC0003DMG400017055	PGSC0003DMT400043948	PGSC0003DMT400043948

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-09	38.5	83	125

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++++   ++++p CgH fh++C+  w       +k+ +CP+Cr
   Q: 83   CSICLSEYQENeiLRIMPkCGHSFHLSCIDIW------LRKQSTCPVCR 125
           ********55445888889*************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNLITTIIGF GMSATFIVFV CTRLICGRIS RRQSRQMFEI ESGIDLEQPE HRINGLDSVM 60
VAAIPTMKFH SEAFTSSEED TQCSICLSEY QENEILRIMP KCGHSFHLSC IDIWLRKQST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCTTCTCT CATCCACACT ATCCATTATG GCCCTATTCT TGGTCTTAAT TCTTTTAACT 60
TAGAGTCCAC CCAAAGAGAT TAGGATTCAA TGTTAGATGG GATTTTTTTT GAAAAAAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000178	Aegilops tauschii	41.03	2.00e-29	120.00
IUUC-Bdi-014804	Brachypodium distachyon	43.17	3.00e-36	143.00
IUUC-Gma-043419	Glycine max	66.03	2.00e-56	210.00
IUUC-Hvu-047427	Hordeum vulgare	40.21	3.00e-34	136.00
IUUC-Lpe-051361	Leersia perrieri	53.29	2.00e-38	151.00
IUUC-Mtr-057883	Medicago truncatula	64.74	3.00e-55	206.00
IUUC-Mac-065266	Musa acuminata	53.80	7.00e-50	188.00
IUUC-Oba-075171	Oryza barthii	48.11	6.00e-42	162.00
IUUC-Obr-076241	Oryza brachyantha	50.83	3.00e-44	170.00
IUUC-Ogl-076928	Oryza glaberrima	50.00	2.00e-30	124.00
IUUC-Ogu-078077	Oryza glumaepatula	48.11	6.00e-42	162.00
IUUC-Oin-079905	Oryza indica	48.11	6.00e-42	162.00
IUUC-Olo-080843	Oryza longistaminata	50.00	2.00e-30	124.00
IUUC-Ome-081424	Oryza meridionalis	48.11	3.00e-42	164.00
IUUC-Oni-082602	Oryza nivara	48.11	6.00e-42	162.00
IUUC-Opu-083909	Oryza punctata	47.57	4.00e-40	156.00
IUUC-Oru-084703	Oryza rufipogon	49.17	2.00e-41	160.00
IUUC-Osa-085851	Oryza sativa	48.11	6.00e-42	162.00
IUUC-Pop-099965	Populus trichocarpa	63.64	4.00e-66	242.00
IUUC-Ppe-102002	Prunus persica	65.41	4.00e-68	249.00
IUUC-Sit-110325	Setaria italica	44.39	3.00e-42	163.00
IUUC-Sly-110894	Solanum lycopersicum	99.44	3.00e-103	365.00
IUUC-Tca-120974	Theobroma cacao	66.84	6.00e-69	252.00
IUUC-Tae-124617	Triticum aestivum	45.24	3.00e-39	153.00
IUUC-Tur-126495	Triticum urartu	39.78	6.00e-36	142.00
IUUC-Vvi-131137	Vitis vinifera	68.02	7.00e-74	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence