iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d002621	Zm00001d002621_T003	Zm00001d002621_T003
Zm00001d002621	Zm00001d002621_T002	Zm00001d002621_T002
Zm00001d002621	Zm00001d002621_T004	Zm00001d002621_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	33.9	88	130

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++++   +++ p C H fh+ Cl  w        k+ +CP+Cr
   Q: 88   CSICLGEYREKeiLRIIPtCRHSFHLACLDLW------LEKQTTCPICR 130
           ********44344888889*************......**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MFGSGLNLVS AALGFGMTAA FAAFVCVRFI CCRERRGDTR APPSPDFAAE LDGPIERTRT 60
GLEPLVIAAI PTMKYNCEAF NSKDDVQCSI CLGEYREKEI LRIIPTCRHS FHLACLDLWL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTTGACTC GGAGTAAGTC CTCTCCGTCT CAGCTCGCGA GCCACAGTAG CAGCCGCCCC 60
TTCAGCCTCC ATCATCTGGC GCTCGTCCGC TCCCTTCCTC CGCACCTCGC CACCGGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

zma:100281828

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000178	Aegilops tauschii	59.06	1.00e-45	175.00
IUUC-Bdi-014804	Brachypodium distachyon	60.29	7.00e-49	186.00
IUUC-Hvu-047427	Hordeum vulgare	60.49	7.00e-55	206.00
IUUC-Lpe-051221	Leersia perrieri	60.77	2.00e-49	187.00
IUUC-Mtr-057883	Medicago truncatula	50.00	6.00e-38	149.00
IUUC-Oba-075242	Oryza barthii	59.71	7.00e-51	192.00
IUUC-Obr-076776	Oryza brachyantha	59.33	1.00e-48	185.00
IUUC-Ogl-076928	Oryza glaberrima	59.71	7.00e-51	192.00
IUUC-Ogu-078449	Oryza glumaepatula	59.71	1.00e-50	191.00
IUUC-Oin-079044	Oryza indica	59.71	7.00e-51	192.00
IUUC-Olo-080843	Oryza longistaminata	59.71	9.00e-51	192.00
IUUC-Ome-081251	Oryza meridionalis	59.71	3.00e-50	190.00
IUUC-Oni-082577	Oryza nivara	59.71	7.00e-51	192.00
IUUC-Opu-084095	Oryza punctata	60.68	2.00e-50	191.00
IUUC-Oru-084932	Oryza rufipogon	59.22	3.00e-51	194.00
IUUC-Osa-085850	Oryza sativa	58.25	7.00e-49	186.00
IUUC-Sit-110733	Setaria italica	75.25	9.00e-71	259.00
IUUC-Sly-110894	Solanum lycopersicum	52.94	1.00e-41	161.00
IUUC-Stu-112119	Solanum tuberosum	51.91	2.00e-38	151.00
IUUC-Tae-125144	Triticum aestivum	63.11	6.00e-64	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence