iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135153

UUCD1 version

UUC-ZeM-01085

Ensembl Protein ID

Zm00001d003497_T001

UniProt Accession

B4FNL4; B4FNL4_MAIZE

Genbank Protein ID

ACF83707.1; ACF84348.1; ONM17053.1

Protein Name

RING-H2 finger protein ATL54

Genbank Nucleotide ID

BT038702; BT039343; CM007648

Gene Name

ZEAMMB73_Zm00001d003497

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d003497	Zm00001d003497_T001	Zm00001d003497_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-07	31.6	200	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f+dg  +++lp C H+fh  C+  w       + + +CP+Cr
   Q: 200  CSVCLGEFQDGelVRLLPkCAHAFHVPCIDTW------LRAHVNCPVCR 242
           ********9988899999**************......**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MRPRRRALFP LHSAGAGACG DPWADCQTPP PVPSTPDSGP GPSPSLPPYG DLPCPPVLSP 60
SPSPSPAPAH NGRRNQGGTQ GYGPPPGAGD HDRRHLVKYA LIAAGVFAFV CLILLGVSVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCTC GCCGCCGGGC CCTCTTCCCG TTGCACAGCG CAGGCGCTGG GGCCTGCGGT 60
GACCCGTGGG CCGACTGCCA GACACCACCG CCGGTTCCCA GCACTCCTGA TTCCGGCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

zma:100272434

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014119	Brachypodium distachyon	60.06	2.00e-59	222.00
IUUC-Bol-016093	Brassica oleracea	61.73	3.00e-27	115.00
IUUC-Lpe-051048	Leersia perrieri	55.60	2.00e-52	199.00
IUUC-Mac-064782	Musa acuminata	70.93	4.00e-34	138.00
IUUC-Oba-075433	Oryza barthii	52.67	4.00e-45	174.00
IUUC-Ogl-077013	Oryza glaberrima	55.38	2.00e-38	152.00
IUUC-Ogu-078886	Oryza glumaepatula	55.00	3.00e-38	152.00
IUUC-Oin-079205	Oryza indica	54.41	2.00e-38	152.00
IUUC-Ome-081516	Oryza meridionalis	58.46	3.00e-38	152.00
IUUC-Oni-082231	Oryza nivara	53.82	2.00e-38	152.00
IUUC-Opu-084102	Oryza punctata	56.23	1.00e-53	202.00
IUUC-Oru-085019	Oryza rufipogon	55.38	2.00e-38	152.00
IUUC-Osa-085718	Oryza sativa	58.62	5.00e-38	151.00
IUUC-Ppe-101356	Prunus persica	57.47	1.00e-29	122.00
IUUC-Sit-110484	Setaria italica	67.95	8.00e-44	170.00
IUUC-Sbi-114872	Sorghum bicolor	71.83	1.00e-55	209.00
IUUC-Tae-125926	Triticum aestivum	56.06	6.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence