iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d003742	Zm00001d003742_T003	Zm00001d003742_T003
Zm00001d003742	Zm00001d003742_T005	Zm00001d003742_T005
Zm00001d003742	Zm00001d003742_T004	Zm00001d003742_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-27	94.5	377	410

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+d vtc++f   ++++++sGs Dg++++WD+ +
   Q: 377  HKDYVTCVQFnpiDEKYFISGSVDGKVRIWDVLD 410
           ***********9777****************866 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPSSEPDSDD VFFDAFEDVR SAGEPSCSED CSTSDEVSVV KFEYEIWANE PMSVQERRQR 60
FLKGMGFDDF VSSRTDSFQC HGEITAVESS TGMEVRTASC HSSVDSSVCD NESEFDGACC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGATTTTC AGTTCGGTCT GAGTATCTTG CTATATGCTG CCGCGCTTTT GGCCCATCTC 60
GGCGAACTTT CCTCTCGTCA TTCGTGGTAC TGTAAACAGT GAACTGCTTT CGGCGAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043677	Glycine max	39.83	5.00e-123	434.00
IUUC-Pop-099696	Populus trichocarpa	40.36	5.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence