iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118045

UUCD1 version

UUC-TaR-00059

Ensembl Protein ID

ENSTRUP00000002444.1

UniProt Accession

H2RQM9; H2RQM9_TAKRU

Protein Name

Uncharacterized protein

Gene Name

syvn1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000001045.1	ENSTRUT00000002456.1	ENSTRUP00000002444.1
ENSTRUG00000001045.1	ENSTRUT00000002457.1	ENSTRUP00000002445.1
ENSTRUG00000001045.1	ENSTRUT00000002458.1	ENSTRUP00000002446.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-09	37.9	290	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +g + lpC+H+fh +Cl  w       +++++CP+Cr
   Q: 290  CIICREEMVTGAKKLPCNHIFHSSCLRSW------FQRQQTCPTCR 329
           ********9*9******************......**********8 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MVRAVLVTAT SLALTGAVVA HAYLLKHQFY PTVVYLTKSS PSMAVLYIQA FVLVFILGKF 60
MRKVFFGQLR AAEMEHLIER SWYAVTETCL AFTVFRDDFS PRFVALFTLL LFLKCFHWLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCCCTGCG AGCAAGCCTG AGATAAAAAC ACGTAGCAAG ACAAGCAGGG ACGAGGATAA 60
TACATCTTCT GAAGGCTTAC TACAAAAGAA TGGAAATGTA ATAGCTGTAT ATTTTTAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0044322--C:endoplasmic reticulum quality control compartment
GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:1990381--F:ubiquitin-specific protease binding
GO:0051082--F:unfolded protein binding
GO:0008270--F:zinc ion binding
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	36.69	2.00e-51	196.00
IUUC-Aml-001539	Ailuropoda melanoleuca	89.91	0.00e+00	639.00
IUUC-Atr-002892	Amborella trichopoda	43.97	2.00e-79	290.00
IUUC-Apl-004003	Anas platyrhynchos	89.83	1.00e-61	227.00
IUUC-Aca-004799	Anolis carolinensis	91.25	2.00e-179	622.00
IUUC-Aly-006352	Arabidopsis lyrata	42.90	2.00e-76	279.00
IUUC-Ath-006773	Arabidopsis thaliana	43.23	4.00e-76	278.00
IUUC-Ago-007894	Ashbya gossypii	25.53	4.00e-20	93.20
IUUC-Acl-008041	Aspergillus clavatus	32.49	4.00e-58	219.00
IUUC-Afl-008427	Aspergillus flavus	32.03	2.00e-51	197.00
IUUC-Afu-009023	Aspergillus fumigatus	31.74	2.00e-57	216.00
IUUC-Ani-009133	Aspergillus nidulans	31.77	3.00e-57	216.00
IUUC-Ang-009612	Aspergillus niger	34.30	3.00e-56	213.00
IUUC-Aor-010045	Aspergillus oryzae	31.77	2.00e-57	217.00
IUUC-Ate-010533	Aspergillus terreus	33.00	6.00e-57	215.00
IUUC-Ame-011083	Astyanax mexicanus	95.27	0.00e+00	641.00
IUUC-Bgr-012122	Blumeria graminis	34.25	4.00e-26	113.00
IUUC-Bta-013375	Bos taurus	89.85	0.00e+00	636.00
IUUC-Bci-013675	Botrytis cinerea	39.22	9.00e-25	108.00
IUUC-Bdi-015070	Brachypodium distachyon	41.62	6.00e-69	254.00
IUUC-Bol-015674	Brassica oleracea	41.95	7.00e-76	278.00
IUUC-Bra-017516	Brassica rapa	41.45	1.00e-72	266.00
IUUC-Cel-018422	Caenorhabditis elegans	57.19	7.00e-115	407.00
IUUC-Cja-019779	Callithrix jacchus	87.28	6.00e-174	603.00
IUUC-Cfa-020189	Canis familiaris	89.85	0.00e+00	637.00
IUUC-Cpo-022209	Cavia porcellus	89.61	0.00e+00	635.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	38.29	5.00e-63	234.00
IUUC-Csa-023571	Chlorocebus sabaeus	89.85	0.00e+00	636.00
IUUC-Cho-024889	Choloepus hoffmanni	81.31	5.00e-163	567.00
IUUC-Csv-026160	Ciona savignyi	61.96	3.00e-125	442.00
IUUC-Cne-027002	Cryptococcus neoformans	40.11	6.00e-75	275.00
IUUC-Cme-027285	Cyanidioschyzon merolae	36.21	2.00e-49	190.00
IUUC-Dre-027999	Danio rerio	94.96	0.00e+00	642.00
IUUC-Dno-029250	Dasypus novemcinctus	89.91	0.00e+00	640.00
IUUC-Dor-030718	Dipodomys ordii	85.46	1.00e-173	603.00
IUUC-Dse-031498	Dothistroma septosporum	35.98	1.00e-27	118.00
IUUC-Dme-031969	Drosophila melanogaster	65.98	8.00e-142	497.00
IUUC-Eca-033258	Equus caballus	89.91	0.00e+00	639.00
IUUC-Fca-035980	Felis catus	89.88	0.00e+00	639.00
IUUC-Fal-037554	Ficedula albicollis	66.09	4.00e-94	338.00
IUUC-Fox-037902	Fusarium oxysporum	31.57	8.00e-53	201.00
IUUC-Fso-038418	Fusarium solani	30.46	5.00e-49	189.00
IUUC-Gmo-039288	Gadus morhua	95.73	0.00e+00	656.00
IUUC-Ggr-040076	Gaeumannomyces graminis	39.33	3.00e-27	117.00
IUUC-Gga-040347	Gallus gallus	88.81	2.00e-72	264.00
IUUC-Gac-042347	Gasterosteus aculeatus	95.90	0.00e+00	648.00
IUUC-Gma-044123	Glycine max	44.25	2.00e-75	276.00
IUUC-Ggo-044858	Gorilla gorilla	89.91	0.00e+00	639.00
IUUC-Hsa-046412	Homo sapiens	89.91	0.00e+00	639.00
IUUC-Hvu-047279	Hordeum vulgare	41.62	4.00e-68	251.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	89.85	0.00e+00	634.00
IUUC-Kpa-049117	Komagataella pastoris	31.00	3.00e-32	132.00
IUUC-Lch-049533	Latimeria chalumnae	47.97	2.00e-70	259.00
IUUC-Lpe-051229	Leersia perrieri	33.02	1.00e-32	133.00
IUUC-Loc-052843	Lepisosteus oculatus	92.13	3.00e-119	421.00
IUUC-Lma-052997	Leptosphaeria maculans	33.59	1.00e-59	224.00
IUUC-Laf-053482	Loxodonta africana	89.85	0.00e+00	633.00
IUUC-Mcc-055075	Macaca mulatta	89.91	0.00e+00	639.00
IUUC-Meu-056683	Macropus eugenii	90.84	2.00e-140	492.00
IUUC-Mor-057082	Magnaporthe oryzae	32.59	1.00e-55	211.00
IUUC-Mpo-057573	Magnaporthe poae	31.41	1.00e-50	194.00
IUUC-Mtr-058601	Medicago truncatula	42.94	4.00e-79	288.00
IUUC-Mla-059168	Melampsora laricipopulina	41.00	2.00e-75	276.00
IUUC-Mga-059510	Meleagris gallopavo	93.98	7.00e-45	173.00
IUUC-Mvi-060515	Microbotryum violaceum	41.62	6.00e-65	242.00
IUUC-Mmr-060922	Microcebus murinus	89.91	0.00e+00	637.00
IUUC-Mdo-062491	Monodelphis domestica	89.91	2.00e-179	622.00
IUUC-Mmu-063770	Mus musculus	89.88	0.00e+00	636.00
IUUC-Mac-064789	Musa acuminata	42.77	7.00e-79	288.00
IUUC-Mpu-066107	Mustela putorius furo	89.15	0.00e+00	637.00
IUUC-Mlu-067918	Myotis lucifugus	90.35	2.00e-170	592.00
IUUC-Nfi-068389	Neosartorya fischeri	31.96	2.00e-56	214.00
IUUC-Ncr-068742	Neurospora crassa	32.83	1.00e-49	191.00
IUUC-Nle-069139	Nomascus leucogenys	89.91	0.00e+00	639.00
IUUC-Opr-070898	Ochotona princeps	86.38	1.00e-111	396.00
IUUC-Ont-071991	Oreochromis niloticus	95.14	0.00e+00	667.00
IUUC-Ocu-074065	Oryctolagus cuniculus	89.61	0.00e+00	637.00
IUUC-Oba-075221	Oryza barthii	40.97	4.00e-67	248.00
IUUC-Obr-076914	Oryza brachyantha	42.67	2.00e-62	233.00
IUUC-Ogu-078124	Oryza glumaepatula	40.97	4.00e-67	248.00
IUUC-Oin-080013	Oryza indica	39.26	9.00e-64	237.00
IUUC-Olo-080247	Oryza longistaminata	39.10	4.00e-59	222.00
IUUC-Ome-081769	Oryza meridionalis	41.55	6.00e-70	258.00
IUUC-Oni-082946	Oryza nivara	40.97	4.00e-67	248.00
IUUC-Opu-083268	Oryza punctata	36.59	7.00e-49	188.00
IUUC-Oru-085114	Oryza rufipogon	40.97	4.00e-67	248.00
IUUC-Osa-085829	Oryza sativa	41.62	8.00e-69	254.00
IUUC-Ola-087449	Oryzias latipes	95.82	0.00e+00	647.00
IUUC-Olu-087894	Ostreococcus lucimarinus	42.17	6.00e-73	267.00
IUUC-Oga-089036	Otolemur garnettii	89.85	0.00e+00	635.00
IUUC-Oar-089715	Ovis aries	89.91	0.00e+00	639.00
IUUC-Ptr-091000	Pan troglodytes	89.85	0.00e+00	634.00
IUUC-Pan-092187	Papio anubis	89.91	0.00e+00	639.00
IUUC-Psi-093377	Pelodiscus sinensis	91.75	4.00e-171	594.00
IUUC-Pma-094759	Petromyzon marinus	91.37	2.00e-77	282.00
IUUC-Pno-094883	Phaeosphaeria nodorum	33.42	2.00e-57	217.00
IUUC-Ppa-095684	Physcomitrella patens	44.20	3.00e-71	262.00
IUUC-Pfo-096861	Poecilia formosa	95.55	0.00e+00	659.00
IUUC-Pab-098030	Pongo abelii	89.91	0.00e+00	638.00
IUUC-Pop-099245	Populus trichocarpa	44.25	2.00e-83	303.00
IUUC-Pca-100191	Procavia capensis	85.96	3.00e-175	608.00
IUUC-Ppe-101829	Prunus persica	44.71	8.00e-82	297.00
IUUC-Pva-102689	Pteropus vampyrus	89.91	0.00e+00	640.00
IUUC-Pgr-103286	Puccinia graminis	38.25	1.00e-71	264.00
IUUC-Ptt-103919	Puccinia triticina	37.74	2.00e-69	256.00
IUUC-Pte-104372	Pyrenophora teres	33.75	6.00e-63	235.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	33.00	3.00e-60	226.00
IUUC-Rno-105723	Rattus norvegicus	89.85	0.00e+00	635.00
IUUC-Sce-106348	Saccharomyces cerevisiae	26.09	7.00e-24	105.00
IUUC-Sha-107300	Sarcophilus harrisii	90.49	2.00e-141	495.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	28.53	5.00e-39	155.00
IUUC-Spo-108308	Schizosaccharomyces pombe	29.15	3.00e-38	153.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	39.22	7.00e-25	109.00
IUUC-Smo-109123	Selaginella moellendorffii	46.06	9.00e-74	270.00
IUUC-Sit-110276	Setaria italica	42.18	9.00e-70	257.00
IUUC-Sly-111819	Solanum lycopersicum	45.60	7.00e-75	274.00
IUUC-Stu-112048	Solanum tuberosum	42.81	5.00e-77	281.00
IUUC-Sbi-114027	Sorghum bicolor	40.56	3.00e-77	282.00
IUUC-Sre-115212	Sporisorium reilianum	37.94	1.00e-62	234.00
IUUC-Ssc-116323	Sus scrofa	89.55	0.00e+00	631.00
IUUC-Tgu-117156	Taeniopygia guttata	84.42	4.00e-36	142.00
IUUC-Tsy-118823	Tarsius syrichta	78.06	8.00e-144	502.00
IUUC-Tni-120106	Tetraodon nigroviridis	96.84	3.00e-135	474.00
IUUC-Tca-121462	Theobroma cacao	44.61	9.00e-81	294.00
IUUC-Tre-122204	Trichoderma reesei	39.74	5.00e-28	119.00
IUUC-Tvi-122550	Trichoderma virens	40.14	7.00e-28	119.00
IUUC-Tae-125239	Triticum aestivum	42.49	1.00e-71	264.00
IUUC-Tur-126538	Triticum urartu	38.97	4.00e-49	189.00
IUUC-Tme-127197	Tuber melanosporum	39.83	5.00e-66	246.00
IUUC-Tbe-127385	Tupaia belangeri	75.84	3.00e-163	568.00
IUUC-Ttr-128795	Tursiops truncatus	89.91	0.00e+00	638.00
IUUC-Uma-129401	Ustilago maydis	37.01	1.00e-53	204.00
IUUC-Vda-129968	Verticillium dahliae	29.47	1.00e-44	174.00
IUUC-Vvi-130944	Vitis vinifera	45.19	2.00e-81	296.00
IUUC-Xtr-131884	Xenopus tropicalis	88.10	5.00e-178	617.00
IUUC-Xma-133488	Xiphophorus maculatus	95.25	0.00e+00	657.00
IUUC-Yli-134552	Yarrowia lipolytica	27.12	6.00e-38	151.00
IUUC-Zma-135530	Zea mays	42.73	1.00e-67	250.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence