iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135381

Ensembl Protein ID

Zm00001d005461_T001

UniProt Accession

A0A1D6EN44; A0A1D6EN44_MAIZE

Genbank Protein ID

ONM21228.1

Protein Name

Protein transport protein SEC13 homolog B

Genbank Nucleotide ID

CM007648

Gene Name

ZEAMMB73_Zm00001d005461

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d005461	Zm00001d005461_T001	Zm00001d005461_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-18	66.4	221	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf........sdtllvsGsdDgtikvW 28
           Htd v+++a+        s  +++s+s Dg++ +W
   Q: 221  HTDCVRDVAWapvlglakS--TIASASQDGKVVIW 253
           ***********88877543..69************ PP

Organism

Zea mays

Protein Sequence
(Fasta)

MQTCEQGSSM VQFGNMSSKK IELDHKDMVH DSAIDYYGKR LATASSDSTV KIINIGAANA 60
PSQVLATLSG HYGPVWRVAW AHPKYGAILA SCSYDGRVII WKEDARGNWS QVHVFSDNKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGACTT GTGAACAAGG CAGCAGCATG GTTCAGTTTG GAAACATGTC ATCAAAGAAG 60
ATAGAGTTGG ATCACAAGGA CATGGTCCAT GATTCTGCTA TCGACTACTA TGGCAAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000731	Aegilops tauschii	77.89	2.00e-136	478.00
IUUC-Cel-018479	Caenorhabditis elegans	38.72	6.00e-56	210.00
IUUC-Lpe-050873	Leersia perrieri	85.33	1.00e-149	521.00
IUUC-Obr-076010	Oryza brachyantha	85.52	1.00e-145	508.00
IUUC-Olo-080759	Oryza longistaminata	86.33	1.00e-149	521.00
IUUC-Opu-084097	Oryza punctata	86.53	2.00e-148	518.00
IUUC-Osa-085681	Oryza sativa	78.33	1.00e-138	485.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence