iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d005538	Zm00001d005538_T001	Zm00001d005538_T001
Zm00001d005538	Zm00001d005538_T011	Zm00001d005538_T011
Zm00001d005538	Zm00001d005538_T004	Zm00001d005538_T004
Zm00001d005538	Zm00001d005538_T005	Zm00001d005538_T005
Zm00001d005538	Zm00001d005538_T006	Zm00001d005538_T006
Zm00001d005538	Zm00001d005538_T010	Zm00001d005538_T010
Zm00001d005538	Zm00001d005538_T008	Zm00001d005538_T008

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-10	41.5	149	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf...sdtllvsGsdDgtikvWDlrtgvll 36
           ++f    +++l+sGs D+ +++WD +t +++
   Q: 149  VRFhpqRSDILASGSLDCEVRLWDAKTSRCT 179
           4556453399**************9999987 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAECRIQDWK RASTPESVSR HETSIPRTKQ RNIFSLLAQR ELSPRTKNQA KNLWTKPPRL 60
DACPIESKFW GTYAQHDLLS WAEAEFLHWW IPKYCPLTPS SKATIAAAFS TDGRVLASTH 120

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Nucleotide Sequence
(Fasta)

GTCTCTTTCT TCTATTTTCC ACGCTGTTCC GTTGCTGTCT GCCTCCAGCC TCCTGCCGTT 60
ACGAGCGCGT CAGGGTTTTT CCTTGGCCAG CCGGCGGCGG CCGTTGCACC TCCTCCATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016250	Brassica oleracea	46.17	3.00e-121	428.00
IUUC-Cin-025567	Ciona intestinalis	40.52	2.00e-23	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence