iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d006455	Zm00001d006455_T001	Zm00001d006455_T001
Zm00001d006455	Zm00001d006455_T004	Zm00001d006455_T004
Zm00001d006455	Zm00001d006455_T002	Zm00001d006455_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-07	31.3	315	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           ++s++++    ++ +l++s++ D  +++WD+ t
   Q: 315  SGSIRSI-VrhPElPLIASCGLDSYLRIWDTNT 346
           5788888.4478899***************765 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPRTTVVESS GCPPLRALTT DILGLVKVVE AHARPAGAAK VVETWGAPDA SRAIVAASLA 60
DRAADPVLAV ARRNGVVELL NPLNGSALAA VKTAGSAPND SGAEGDPLAA LHLFARQTSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACTCTGCG ACTGCTCACG CCACCACCTT TGTTTGTTTG AGGAAATTCT AAGCACCACC 60
TGGCCAGGCT GAAACTCTAG CGCGACTGGC TTTTTCCACG GCCCGGCCCG TCAAATCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dor-030529	Dipodomys ordii	32.63	1.00e-07	50.40
IUUC-Meu-056160	Macropus eugenii	36.52	3.00e-13	68.60
IUUC-Ogl-077112	Oryza glaberrima	71.00	1.00e-171	595.00
IUUC-Ogu-078172	Oryza glumaepatula	67.61	2.00e-156	544.00
IUUC-Oin-080070	Oryza indica	70.78	6.00e-171	593.00
IUUC-Olo-080534	Oryza longistaminata	67.28	6.00e-136	477.00
IUUC-Ome-081869	Oryza meridionalis	69.64	2.00e-168	584.00
IUUC-Opu-083828	Oryza punctata	71.30	4.00e-168	583.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence