iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135385

UUCD1 version

UUC-ZeM-00991

Ensembl Protein ID

Zm00001d007609_T001

UniProt Accession

B4FAG4; B4FAG4_MAIZE

Genbank Protein ID

ACF79107.1; ACF87921.1; ACG42446.1; ACN28626.1; ONM27212.1

Protein Name

RING-H2 finger protein ATL54; Zinc finger, C3HC4 type family protein

Genbank Nucleotide ID

BT034102; BT042916; EU970328; BT063929; CM007648

Gene Name

ZEAMMB73_Zm00001d007609

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d007609	Zm00001d007609_T001	Zm00001d007609_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	30.9	207	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   ++ +++lp C H+fh+ C+  w       + + +CPlCr
   Q: 207  CAVCLAEFrhgET-LRLLPrCAHAFHRACIDTW------LRAHVNCPLCR 249
           ********55333.999999*************......**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPPPLPLPEE EEEEKPLPRR KPEPKPPKPK PTKRPRPIGP LPQRDGDPGG GVATSPPLLF 60
CGDGCSGPCA YLPQCQPPPP PSPGATVRLR SSRLPTPLVA LSASLLTVSA VLLLALLVHC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCCGC CGCTGCCGCT GCCGGAGGAG GAGGAGGAGG AGAAGCCGCT GCCGCGGCGA 60
AAGCCAGAGC CGAAGCCGCC TAAGCCCAAG CCCACCAAGA GGCCCAGGCC GATTGGGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

zma:100191865

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014787	Brachypodium distachyon	56.03	2.00e-43	169.00
IUUC-Hvu-047548	Hordeum vulgare	53.87	3.00e-53	201.00
IUUC-Lpe-051021	Leersia perrieri	56.16	8.00e-46	177.00
IUUC-Ogl-077549	Oryza glaberrima	54.93	5.00e-48	184.00
IUUC-Ogu-078888	Oryza glumaepatula	76.67	2.00e-32	132.00
IUUC-Ome-081161	Oryza meridionalis	57.82	1.00e-49	189.00
IUUC-Oni-082446	Oryza nivara	60.00	7.00e-49	187.00
IUUC-Opu-083814	Oryza punctata	56.96	3.00e-50	192.00
IUUC-Oru-084508	Oryza rufipogon	58.57	1.00e-49	190.00
IUUC-Osa-086278	Oryza sativa	59.43	2.00e-48	186.00
IUUC-Sit-110395	Setaria italica	60.79	2.00e-50	192.00
IUUC-Sbi-114179	Sorghum bicolor	68.61	5.00e-61	227.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence