iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135577

Ensembl Protein ID

Zm00001d008654_T009

UniProt Accession

A0A1D6FEL1; A0A1D6FEL1_MAIZE

Genbank Protein ID

AQK90362.1; AQK90363.1; AQK90367.1; AQK90370.1; AQK90371.1; AQK90376.1; AQK90377.1; AQK90379.1; AQK90381.1; AQK90383.1; AQK90384.1; AQK90385.1; AQK90386.1; AQK90392.1

Protein Name

WD40/YVTN repeat-like-containing domain

Genbank Nucleotide ID

CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784; CM000784

Gene Name

ZEAMMB73_Zm00001d008654

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d008654	Zm00001d008654_T061	Zm00001d008654_T061
Zm00001d008654	Zm00001d008654_T010	Zm00001d008654_T010
Zm00001d008654	Zm00001d008654_T009	Zm00001d008654_T009
Zm00001d008654	Zm00001d008654_T038	Zm00001d008654_T038
Zm00001d008654	Zm00001d008654_T002	Zm00001d008654_T002
Zm00001d008654	Zm00001d008654_T003	Zm00001d008654_T003
Zm00001d008654	Zm00001d008654_T006	Zm00001d008654_T006
Zm00001d008654	Zm00001d008654_T013	Zm00001d008654_T013
Zm00001d008654	Zm00001d008654_T007	Zm00001d008654_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-25	89.5	323	357
UBD/Beta-Prp	2.80e-44	153.5	230	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDl 30
           gHt+ vt++af   ++    l+s+sdDgt+++WD 
   Q: 323  GHTGAVTAIAFsprPGaaFQLLSSSDDGTCRIWDA 357
           8**********988555555**************5 PP

UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
           + +++  l+gh++ v++ +f+++g ++++Gs+dr +++w +et  cl    +gh+g ++ ++v++++++++s+s+D ++r+W+++ g  +
   Q: 230  KMQIIKRLRGHQNAVYCATFDRTGRYVITGSDDRLVKIWAMETAFCLA-SCRGHEGDITDLAVSSNNSVVASSSNDFIIRVWRMPDGMPV 318
           445566666666666666666666666666666666666666666666.66666666666666666666666666666666666666666 PP
   S: 173  rtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlq 210
             l+g ht++v+ ++f++     ++l+s s+dgt ++wd +
   Q: 319  SVLKG-HTGAVTAIAFSPRPgaaFQLLSSSDDGTCRIWDAR 358
           66665.66666666666655666666666666666666654 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSFRKRQPSS NGASINLAPL GFPSQELEKV NPVNSVMSTD FESMDGVDID MREVYFLIMH 60
FLSHGPFKRT FGELCNELLE HQLLPRRYHA WYSRGGFHSG EENDDGISLP LDYVKLAERY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCTTCTCG TTCTCCCCCG AGCGGCTCTC GATCTGGTTT GCTCCGCGTC GTCGCTCCCT 60
GGACGTCGCC GCCCTAGTGG TTCGCTTCGC CGCTTCTCGC GCTCTCCGGC TTCTACGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	64.17	0.00e+00	1863.00
IUUC-Aml-001881	Ailuropoda melanoleuca	29.41	5.00e-69	256.00
IUUC-Atr-002600	Amborella trichopoda	69.93	0.00e+00	1104.00
IUUC-Apl-003700	Anas platyrhynchos	38.38	8.00e-32	133.00
IUUC-Aca-004474	Anolis carolinensis	31.11	5.00e-74	273.00
IUUC-Aly-006517	Arabidopsis lyrata	65.02	0.00e+00	1045.00
IUUC-Ath-006801	Arabidopsis thaliana	64.72	0.00e+00	969.00
IUUC-Ame-010718	Astyanax mexicanus	30.30	5.00e-72	266.00
IUUC-Bta-013217	Bos taurus	30.48	1.00e-68	256.00
IUUC-Bdi-014797	Brachypodium distachyon	65.98	0.00e+00	1950.00
IUUC-Bol-015737	Brassica oleracea	64.63	0.00e+00	963.00
IUUC-Bra-017961	Brassica rapa	64.06	0.00e+00	959.00
IUUC-Cja-018868	Callithrix jacchus	30.44	4.00e-74	273.00
IUUC-Cfa-021037	Canis familiaris	30.91	5.00e-70	260.00
IUUC-Cpo-021934	Cavia porcellus	30.19	7.00e-69	256.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	34.75	1.00e-29	124.00
IUUC-Csa-023618	Chlorocebus sabaeus	30.79	2.00e-74	274.00
IUUC-Cho-024690	Choloepus hoffmanni	28.29	4.00e-36	147.00
IUUC-Cin-025702	Ciona intestinalis	36.22	4.00e-32	131.00
IUUC-Csv-025813	Ciona savignyi	26.61	1.00e-56	214.00
IUUC-Dre-028029	Danio rerio	30.24	8.00e-71	262.00
IUUC-Dno-030048	Dasypus novemcinctus	30.34	9.00e-69	255.00
IUUC-Dor-030195	Dipodomys ordii	38.62	5.00e-32	133.00
IUUC-Dme-031752	Drosophila melanogaster	28.72	5.00e-70	260.00
IUUC-Ete-032717	Echinops telfairi	32.92	4.00e-30	127.00
IUUC-Eca-034274	Equus caballus	30.10	2.00e-65	244.00
IUUC-Eeu-034871	Erinaceus europaeus	27.47	5.00e-32	133.00
IUUC-Fca-036099	Felis catus	29.45	3.00e-69	257.00
IUUC-Fal-037307	Ficedula albicollis	30.09	1.00e-71	265.00
IUUC-Gmo-039116	Gadus morhua	28.62	1.00e-22	102.00
IUUC-Gga-040865	Gallus gallus	30.33	1.00e-71	265.00
IUUC-Gac-042435	Gasterosteus aculeatus	29.39	9.00e-59	222.00
IUUC-Gma-043340	Glycine max	58.86	0.00e+00	1090.00
IUUC-Ggo-045500	Gorilla gorilla	30.19	2.00e-69	258.00
IUUC-Hsa-046757	Homo sapiens	30.79	3.00e-74	273.00
IUUC-Hvu-047706	Hordeum vulgare	91.27	3.00e-177	613.00
IUUC-Itr-047962	Ictidomys tridecemlineatus	24.76	8.00e-22	98.20
IUUC-Lch-050646	Latimeria chalumnae	30.53	7.00e-73	269.00
IUUC-Lpe-051619	Leersia perrieri	74.95	0.00e+00	2187.00
IUUC-Loc-052672	Lepisosteus oculatus	30.55	4.00e-72	266.00
IUUC-Laf-053848	Loxodonta africana	29.87	4.00e-68	254.00
IUUC-Mcc-054638	Macaca mulatta	30.04	3.00e-69	257.00
IUUC-Meu-056321	Macropus eugenii	28.50	1.00e-48	189.00
IUUC-Mtr-058094	Medicago truncatula	54.26	0.00e+00	1009.00
IUUC-Mga-060165	Meleagris gallopavo	30.19	1.00e-70	261.00
IUUC-Mmr-061227	Microcebus murinus	30.33	3.00e-70	261.00
IUUC-Mdo-061903	Monodelphis domestica	30.75	7.00e-75	276.00
IUUC-Mmu-063772	Mus musculus	30.94	2.00e-74	274.00
IUUC-Mac-065343	Musa acuminata	55.42	0.00e+00	1603.00
IUUC-Mpu-066628	Mustela putorius furo	29.71	1.00e-71	265.00
IUUC-Mlu-068082	Myotis lucifugus	29.21	7.00e-69	256.00
IUUC-Nle-069402	Nomascus leucogenys	30.19	6.00e-69	256.00
IUUC-Opr-070971	Ochotona princeps	25.05	3.00e-34	141.00
IUUC-Ont-072221	Oreochromis niloticus	32.17	3.00e-73	270.00
IUUC-Oan-072954	Ornithorhynchus anatinus	29.66	6.00e-75	276.00
IUUC-Ocu-074456	Oryctolagus cuniculus	29.84	4.00e-67	250.00
IUUC-Oba-075709	Oryza barthii	74.72	0.00e+00	2292.00
IUUC-Obr-076619	Oryza brachyantha	75.00	0.00e+00	2306.00
IUUC-Ogl-077493	Oryza glaberrima	72.40	0.00e+00	1905.00
IUUC-Ogu-078641	Oryza glumaepatula	70.35	0.00e+00	1693.00
IUUC-Oin-079669	Oryza indica	88.56	0.00e+00	932.00
IUUC-Olo-080755	Oryza longistaminata	72.53	0.00e+00	1849.00
IUUC-Oni-082991	Oryza nivara	70.85	0.00e+00	1828.00
IUUC-Opu-083233	Oryza punctata	74.84	0.00e+00	2318.00
IUUC-Oru-085195	Oryza rufipogon	74.61	0.00e+00	2266.00
IUUC-Ola-086648	Oryzias latipes	30.99	3.00e-73	270.00
IUUC-Olu-087745	Ostreococcus lucimarinus	33.15	1.00e-69	258.00
IUUC-Oga-089053	Otolemur garnettii	29.45	1.00e-68	255.00
IUUC-Oar-090042	Ovis aries	29.45	3.00e-69	257.00
IUUC-Ptr-091213	Pan troglodytes	30.19	2.00e-69	258.00
IUUC-Pan-092734	Papio anubis	30.79	3.00e-74	274.00
IUUC-Psi-093271	Pelodiscus sinensis	31.68	4.00e-64	240.00
IUUC-Pma-094427	Petromyzon marinus	32.92	5.00e-31	127.00
IUUC-Ppa-095793	Physcomitrella patens	56.05	0.00e+00	830.00
IUUC-Pfo-097318	Poecilia formosa	30.43	6.00e-69	256.00
IUUC-Pab-098402	Pongo abelii	30.79	2.00e-74	274.00
IUUC-Pop-099672	Populus trichocarpa	65.22	0.00e+00	1050.00
IUUC-Pca-101128	Procavia capensis	29.91	3.00e-62	234.00
IUUC-Ppe-101849	Prunus persica	59.02	0.00e+00	1126.00
IUUC-Pva-102512	Pteropus vampyrus	29.45	7.00e-69	256.00
IUUC-Rno-105687	Rattus norvegicus	30.48	1.00e-68	255.00
IUUC-Sha-106680	Sarcophilus harrisii	30.20	3.00e-69	257.00
IUUC-Sit-110017	Setaria italica	75.92	0.00e+00	2299.00
IUUC-Sly-111348	Solanum lycopersicum	65.27	0.00e+00	980.00
IUUC-Sar-113004	Sorex araneus	29.14	6.00e-59	223.00
IUUC-Sbi-114195	Sorghum bicolor	96.42	0.00e+00	1182.00
IUUC-Ssc-115461	Sus scrofa	29.12	3.00e-61	230.00
IUUC-Tgu-116513	Taeniopygia guttata	30.06	2.00e-72	268.00
IUUC-Tru-117625	Takifugu rubripes	31.11	1.00e-73	271.00
IUUC-Tsy-119003	Tarsius syrichta	30.86	6.00e-57	216.00
IUUC-Tni-120716	Tetraodon nigroviridis	31.03	2.00e-72	268.00
IUUC-Tca-121615	Theobroma cacao	50.20	0.00e+00	1387.00
IUUC-Tae-125478	Triticum aestivum	70.36	0.00e+00	2168.00
IUUC-Tur-126809	Triticum urartu	67.68	0.00e+00	2132.00
IUUC-Tbe-127479	Tupaia belangeri	38.25	2.00e-31	131.00
IUUC-Ttr-128561	Tursiops truncatus	30.33	3.00e-65	244.00
IUUC-Vpa-130160	Vicugna pacos	30.24	1.00e-67	251.00
IUUC-Vvi-131362	Vitis vinifera	61.62	0.00e+00	1160.00
IUUC-Xtr-132717	Xenopus tropicalis	30.79	9.00e-75	275.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence