iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d009617	Zm00001d009617_T031	Zm00001d009617_T031
Zm00001d009617	Zm00001d009617_T036	Zm00001d009617_T036
Zm00001d009617	Zm00001d009617_T017	Zm00001d009617_T017
Zm00001d009617	Zm00001d009617_T037	Zm00001d009617_T037
Zm00001d009617	Zm00001d009617_T039	Zm00001d009617_T039
Zm00001d009617	Zm00001d009617_T026	Zm00001d009617_T026
Zm00001d009617	Zm00001d009617_T038	Zm00001d009617_T038

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-26	93.0	1009	1043

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           gH   v+ ++f  +  +l+s+s D+t+k+WDl + +
   Q: 1009 GHGKAVSYVRFldP-ETLISASTDNTLKIWDLNQTN 1043
           79999******644.889*************97765 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MRRAGGSLLL ACCARARAPA ARFGAMEGAA AAEVGGGGED VQIKGAKESG QPAAAAQQPP 60
PLPSGSEALE MPATPLPRDM DWSEHFSFFT SPGGFAGSSD GARGLASVGL SNSESRPDSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACCCGCGCC CCGGAACCGC AGCCAATCGG TCGCGGGAGG GGGGGCTCGT GGCGGCGCTG 60
CGCGCGAGGA TGCGCCGCGC GGGCGGCTCG CTTCTGCTGG CCTGCTGCGC CCGCGCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

zma:103635349

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	75.69	0.00e+00	1391.00
IUUC-Atr-002506	Amborella trichopoda	53.00	0.00e+00	769.00
IUUC-Aly-005520	Arabidopsis lyrata	48.53	0.00e+00	735.00
IUUC-Ath-007297	Arabidopsis thaliana	42.18	0.00e+00	710.00
IUUC-Bdi-014698	Brachypodium distachyon	69.99	0.00e+00	1555.00
IUUC-Bol-015237	Brassica oleracea	45.23	0.00e+00	714.00
IUUC-Bra-016642	Brassica rapa	44.76	0.00e+00	702.00
IUUC-Cho-024883	Choloepus hoffmanni	33.23	2.00e-42	166.00
IUUC-Gma-044276	Glycine max	53.22	0.00e+00	796.00
IUUC-Hvu-047750	Hordeum vulgare	75.66	0.00e+00	1371.00
IUUC-Lpe-051349	Leersia perrieri	72.73	0.00e+00	1603.00
IUUC-Mtr-058593	Medicago truncatula	53.56	0.00e+00	800.00
IUUC-Mac-064712	Musa acuminata	49.18	0.00e+00	919.00
IUUC-Oba-075097	Oryza barthii	68.00	0.00e+00	1410.00
IUUC-Obr-076441	Oryza brachyantha	73.37	0.00e+00	1612.00
IUUC-Ogl-077669	Oryza glaberrima	74.31	0.00e+00	1611.00
IUUC-Ogu-078009	Oryza glumaepatula	68.00	0.00e+00	1406.00
IUUC-Oin-079775	Oryza indica	74.22	0.00e+00	1605.00
IUUC-Olo-080230	Oryza longistaminata	66.93	0.00e+00	1380.00
IUUC-Ome-081669	Oryza meridionalis	67.64	0.00e+00	1398.00
IUUC-Oni-082065	Oryza nivara	67.82	0.00e+00	1401.00
IUUC-Opu-083153	Oryza punctata	67.38	0.00e+00	1426.00
IUUC-Oru-084928	Oryza rufipogon	67.73	0.00e+00	1396.00
IUUC-Osa-085875	Oryza sativa	74.13	0.00e+00	1600.00
IUUC-Ppa-096019	Physcomitrella patens	49.68	4.00e-179	621.00
IUUC-Pop-098964	Populus trichocarpa	50.39	0.00e+00	795.00
IUUC-Ppe-101771	Prunus persica	52.56	0.00e+00	785.00
IUUC-Smo-109315	Selaginella moellendorffii	53.40	0.00e+00	668.00
IUUC-Sit-110269	Setaria italica	83.84	0.00e+00	1829.00
IUUC-Sly-111360	Solanum lycopersicum	49.55	0.00e+00	750.00
IUUC-Stu-112382	Solanum tuberosum	48.75	0.00e+00	734.00
IUUC-Sbi-114133	Sorghum bicolor	89.02	0.00e+00	1948.00
IUUC-Tca-121721	Theobroma cacao	47.72	0.00e+00	761.00
IUUC-Tae-125637	Triticum aestivum	75.33	0.00e+00	1383.00
IUUC-Tur-126357	Triticum urartu	73.03	0.00e+00	1336.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence