iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007403

UUCD1 version

UUC-ArT-01226

Ensembl Protein ID

AT3G05545.1

UniProt Accession

Q84WW4; Q84WW4_ARATH

Genbank Protein ID

AAN71920.1; AAY57597.1; AEE74256.1

Protein Name

Putative uncharacterized protein At3g05545; RING finger family protein; RING/U-box superfamily protein

Genbank Nucleotide ID

BT001921; DQ059111; CP002686

Gene Name

At3g05545

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G05545	AT3G05545.1	AT3G05545.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.80e-05	26.0	37	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle      ++ +  l+C H+fh+dC+    g+  ++++  +CP Cr
   Q: 37   CSICLETVvkngDRAWANLQCDHQFHLDCI----GSAFNAKGVMQCPNCR 82
           ******99876655577799*********8....55579**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGLGNKGNKF NFGDNDLADE ASGADGDEGD GFGSVACSIC LETVVKNGDR AWANLQCDHQ 60
FHLDCIGSAF NAKGVMQCPN CRKVEKGQWL YANGCRSYPE FNVEDWVHEE DIYDIGAYSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAAGCTT AGGGGGAAGC AGCTGATGGG TAAAGTAGAC AAATCCGTCA GAATAAATCT 60
GAGCCGTCCA TTCTAGTCTT TGGACAGCGG TCATTGCTTC TACCCCGTAA CCCAATCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

ath:AT3G05545

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000830	Aegilops tauschii	53.42	4.00e-37	148.00
IUUC-Atr-002748	Amborella trichopoda	55.48	2.00e-42	166.00
IUUC-Aly-005896	Arabidopsis lyrata	96.46	5.00e-155	540.00
IUUC-Bol-015640	Brassica oleracea	77.37	9.00e-134	469.00
IUUC-Bra-016676	Brassica rapa	78.83	2.00e-134	471.00
IUUC-Gma-043885	Glycine max	56.01	2.00e-72	265.00
IUUC-Lpe-051497	Leersia perrieri	43.48	6.00e-37	148.00
IUUC-Mtr-058220	Medicago truncatula	48.86	3.00e-78	285.00
IUUC-Mac-065621	Musa acuminata	53.42	5.00e-45	174.00
IUUC-Oba-074989	Oryza barthii	43.63	7.00e-37	147.00
IUUC-Obr-076234	Oryza brachyantha	62.00	3.00e-44	171.00
IUUC-Ogl-077797	Oryza glaberrima	62.00	2.00e-44	172.00
IUUC-Ogu-078071	Oryza glumaepatula	56.08	3.00e-38	151.00
IUUC-Oin-079296	Oryza indica	62.00	2.00e-44	172.00
IUUC-Olo-080222	Oryza longistaminata	58.06	1.00e-30	126.00
IUUC-Ome-081719	Oryza meridionalis	56.33	2.00e-41	162.00
IUUC-Oni-082543	Oryza nivara	44.71	3.00e-39	155.00
IUUC-Opu-083127	Oryza punctata	43.20	2.00e-37	149.00
IUUC-Oru-085073	Oryza rufipogon	57.24	7.00e-46	177.00
IUUC-Osa-086081	Oryza sativa	61.07	1.00e-48	186.00
IUUC-Pop-099904	Populus trichocarpa	55.63	1.00e-69	256.00
IUUC-Ppe-101525	Prunus persica	48.67	4.00e-78	284.00
IUUC-Sit-110374	Setaria italica	62.16	1.00e-49	189.00
IUUC-Sly-110853	Solanum lycopersicum	46.88	3.00e-81	295.00
IUUC-Stu-112616	Solanum tuberosum	47.58	7.00e-80	290.00
IUUC-Sbi-114202	Sorghum bicolor	58.78	5.00e-47	181.00
IUUC-Tca-121669	Theobroma cacao	50.79	3.00e-81	294.00
IUUC-Tae-125197	Triticum aestivum	59.46	2.00e-43	169.00
IUUC-Tur-126263	Triticum urartu	43.55	1.00e-21	97.40
IUUC-Vvi-131398	Vitis vinifera	47.99	3.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence