iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043966

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000843

Gene Name

LOC100810879; GLYMA_10G047200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G05440	GLYMA10G05440.1	GLYMA10G05440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-06	28.4	196	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++   +d ++ lpC+H+fh  C+  w        k+ +CP Cr
   Q: 196  CVICKEEMgigRD-VCELPCQHLFHWMCILPW------LGKRNTCPCCR 237
           ********99555.******************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEETTSAIIM SALSTLTPSQ FSDLTRSILS ATNHHHRRLS SLLSYPTLFS LTLHHLHTLS 60
LPQKTLLIAR HLLSSLHLLT ATSPHFSTAT RQRDLDAALL LLLLCETHNH NPHALEAPVS 120

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Nucleotide Sequence
(Fasta)

ATTTTCAGTC AGTCTTCAAC ATACAGAAAG ATGAAGTTAA AGGTCAAACA GTAGCGTATC 60
CAATCCCATC TTTCTAAAAA TATAACGGAC AACCGACCTA AAAGACATAT TGTAGTCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100810879

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002887	Amborella trichopoda	32.34	8.00e-21	94.40
IUUC-Aly-005538	Arabidopsis lyrata	53.38	1.00e-44	173.00
IUUC-Ath-006921	Arabidopsis thaliana	49.28	8.00e-44	170.00
IUUC-Bdi-014905	Brachypodium distachyon	56.34	1.00e-19	89.70
IUUC-Bol-015815	Brassica oleracea	53.01	3.00e-41	162.00
IUUC-Bra-017782	Brassica rapa	54.35	2.00e-38	152.00
IUUC-Lpe-051463	Leersia perrieri	37.75	1.00e-22	99.40
IUUC-Mac-065543	Musa acuminata	45.42	1.00e-26	113.00
IUUC-Pop-099681	Populus trichocarpa	56.96	2.00e-41	162.00
IUUC-Sbi-114490	Sorghum bicolor	56.72	7.00e-17	80.90
IUUC-Vvi-131513	Vitis vinifera	59.27	1.00e-58	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence