iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112332

Ensembl Protein ID

PGSC0003DMT400028718

UniProt Accession

M1ARK5; M1ARK5_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400011052	PGSC0003DMT400028717	PGSC0003DMT400028717
PGSC0003DMG400011052	PGSC0003DMT400028718	PGSC0003DMT400028718

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-06	28.5	227	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+ed+   +d ++ lpC H++h +C+  w       +k+ +CP Cr
   Q: 227  CVICKEDMklgRD-VCKLPCDHFYHWKCILPW------LKKTNTCPCCR 268
           ********88555.******************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEHQKSLEAI VMEVLSTLTP LQLTKFTHHF SSLYHHNCHR IFSLLSSPTL FSLTLHHLNS 60
LSLRRKSLLI ARHLLSKFAI LAYFVEKNTI LLPSPSITTM SLRDVDAVLM LLLLCELRQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAAACTCA ATTCCTTTTA CCACCAATAA TGCACATGAT CCCATAAAAA TGATGGAACA 60
TCAAAAATCC TTAGAAGCCA TAGTCATGGA AGTTCTTTCT ACCTTAACCC CTCTTCAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002887	Amborella trichopoda	30.19	4.00e-21	94.00
IUUC-Aly-005538	Arabidopsis lyrata	45.70	3.00e-41	160.00
IUUC-Ath-006921	Arabidopsis thaliana	45.77	7.00e-41	159.00
IUUC-Bdi-014905	Brachypodium distachyon	32.50	3.00e-21	94.00
IUUC-Bol-016141	Brassica oleracea	46.11	5.00e-39	153.00
IUUC-Bra-017782	Brassica rapa	44.62	9.00e-40	155.00
IUUC-Gma-042685	Glycine max	44.57	8.00e-38	149.00
IUUC-Lpe-051463	Leersia perrieri	34.55	5.00e-26	109.00
IUUC-Oba-075686	Oryza barthii	32.93	7.00e-23	99.40
IUUC-Ogu-078394	Oryza glumaepatula	32.93	7.00e-23	99.40
IUUC-Oin-079750	Oryza indica	32.93	2.00e-23	101.00
IUUC-Oni-082513	Oryza nivara	32.93	2.00e-23	102.00
IUUC-Oru-084366	Oryza rufipogon	32.93	8.00e-23	99.00
IUUC-Osa-085930	Oryza sativa	32.93	8.00e-24	102.00
IUUC-Pop-099681	Populus trichocarpa	42.71	3.00e-39	154.00
IUUC-Ppe-101554	Prunus persica	46.00	1.00e-40	160.00
IUUC-Sly-111812	Solanum lycopersicum	88.85	9.00e-121	425.00
IUUC-Tca-121044	Theobroma cacao	45.41	9.00e-44	169.00
IUUC-Vvi-131513	Vitis vinifera	50.85	1.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence