iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d011140	Zm00001d011140_T035	Zm00001d011140_T035
Zm00001d011140	Zm00001d011140_T029	Zm00001d011140_T029
Zm00001d011140	Zm00001d011140_T001	Zm00001d011140_T001
Zm00001d011140	Zm00001d011140_T013	Zm00001d011140_T013
Zm00001d011140	Zm00001d011140_T003	Zm00001d011140_T003
Zm00001d011140	Zm00001d011140_T041	Zm00001d011140_T041
Zm00001d011140	Zm00001d011140_T012	Zm00001d011140_T012
Zm00001d011140	Zm00001d011140_T040	Zm00001d011140_T040
Zm00001d011140	Zm00001d011140_T004	Zm00001d011140_T004
Zm00001d011140	Zm00001d011140_T018	Zm00001d011140_T018
Zm00001d011140	Zm00001d011140_T037	Zm00001d011140_T037
Zm00001d011140	Zm00001d011140_T024	Zm00001d011140_T024
Zm00001d011140	Zm00001d011140_T008	Zm00001d011140_T008
Zm00001d011140	Zm00001d011140_T021	Zm00001d011140_T021
Zm00001d011140	Zm00001d011140_T015	Zm00001d011140_T015
Zm00001d011140	Zm00001d011140_T007	Zm00001d011140_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-14	55.7	2351	2380

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H +svt +   ++  l+++Gs Dg +k+WD
   Q: 2351 HLGSVTKVTTiPNtSLFLTGSKDGDVKLWD 2380
           9999999985666599************** PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGERDALPPL PLALGPPHLI PPAPTRDPRA IAFLPDLVGF HWVAYAAGSF LVVSHLPSPC 60
RDDNNNDSCS PFFRQVIDLR APVSAVAWCR RGSGEVAAAT DNSIHIFQPA PASSPGSFGW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGTAGTCG CCGGCTTTGC AGAGATCGAC CGTGGTATTG GCAACCGGTG TCCGGTGAGG 60
GGGATCCACG CAACTCCTGC TACCACCACC ATCGCCGCTA CAGCGGCGCA TGCAGCAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

KEGG

zma:103635990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	62.22	2.00e-58	216.00
IUUC-Aml-001368	Ailuropoda melanoleuca	31.58	5.00e-40	161.00
IUUC-Atr-002754	Amborella trichopoda	57.81	0.00e+00	653.00
IUUC-Apl-003377	Anas platyrhynchos	26.71	8.00e-40	160.00
IUUC-Aca-004649	Anolis carolinensis	27.60	1.00e-40	163.00
IUUC-Aly-006404	Arabidopsis lyrata	37.21	0.00e+00	1433.00
IUUC-Ath-006612	Arabidopsis thaliana	38.20	0.00e+00	1463.00
IUUC-Afu-009077	Aspergillus fumigatus	29.45	2.00e-44	174.00
IUUC-Ani-009437	Aspergillus nidulans	27.64	4.00e-43	170.00
IUUC-Ang-009742	Aspergillus niger	30.29	4.00e-45	176.00
IUUC-Ame-010919	Astyanax mexicanus	29.77	1.00e-41	166.00
IUUC-Bta-013088	Bos taurus	30.45	1.00e-38	156.00
IUUC-Bdi-014471	Brachypodium distachyon	67.17	0.00e+00	934.00
IUUC-Bol-016375	Brassica oleracea	38.00	0.00e+00	1403.00
IUUC-Bra-016630	Brassica rapa	38.32	0.00e+00	1441.00
IUUC-Cel-018537	Caenorhabditis elegans	31.72	1.00e-26	116.00
IUUC-Cja-019137	Callithrix jacchus	27.21	3.00e-40	161.00
IUUC-Cfa-021215	Canis familiaris	30.97	5.00e-39	157.00
IUUC-Cpo-022333	Cavia porcellus	30.00	2.00e-37	152.00
IUUC-Csa-023151	Chlorocebus sabaeus	28.05	1.00e-40	162.00
IUUC-Cho-024762	Choloepus hoffmanni	29.66	3.00e-36	148.00
IUUC-Csv-026055	Ciona savignyi	35.59	5.00e-39	157.00
IUUC-Dre-028673	Danio rerio	27.09	3.00e-41	165.00
IUUC-Dno-029601	Dasypus novemcinctus	24.69	2.00e-28	122.00
IUUC-Dor-030381	Dipodomys ordii	32.65	5.00e-38	154.00
IUUC-Dme-031825	Drosophila melanogaster	27.36	4.00e-40	161.00
IUUC-Ete-033176	Echinops telfairi	29.29	8.00e-35	144.00
IUUC-Eca-033386	Equus caballus	29.25	6.00e-37	150.00
IUUC-Eeu-035011	Erinaceus europaeus	29.13	8.00e-37	150.00
IUUC-Fca-035735	Felis catus	30.97	6.00e-39	157.00
IUUC-Fal-037367	Ficedula albicollis	28.90	7.00e-39	157.00
IUUC-Gmo-038687	Gadus morhua	27.18	5.00e-38	154.00
IUUC-Gga-040693	Gallus gallus	29.01	3.00e-39	157.00
IUUC-Gac-041986	Gasterosteus aculeatus	26.52	3.00e-41	165.00
IUUC-Gma-044099	Glycine max	39.53	0.00e+00	1603.00
IUUC-Ggo-044811	Gorilla gorilla	27.19	1.00e-40	162.00
IUUC-Hsa-045950	Homo sapiens	27.19	5.00e-40	161.00
IUUC-Hvu-047213	Hordeum vulgare	73.36	6.00e-131	459.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	27.02	2.00e-36	149.00
IUUC-Lch-050020	Latimeria chalumnae	29.47	5.00e-40	160.00
IUUC-Lpe-051382	Leersia perrieri	66.30	0.00e+00	2562.00
IUUC-Loc-052909	Lepisosteus oculatus	27.46	7.00e-42	167.00
IUUC-Laf-054195	Loxodonta africana	27.93	8.00e-41	163.00
IUUC-Mcc-055646	Macaca mulatta	27.12	3.00e-40	161.00
IUUC-Meu-056627	Macropus eugenii	27.25	2.00e-24	109.00
IUUC-Mtr-058725	Medicago truncatula	39.95	0.00e+00	1641.00
IUUC-Mga-059386	Meleagris gallopavo	27.23	5.00e-36	147.00
IUUC-Mmr-060784	Microcebus murinus	27.90	5.00e-41	164.00
IUUC-Mdo-062914	Monodelphis domestica	28.77	9.00e-38	153.00
IUUC-Mmu-063808	Mus musculus	30.13	1.00e-39	159.00
IUUC-Mac-065224	Musa acuminata	45.11	0.00e+00	1876.00
IUUC-Mpu-066054	Mustela putorius furo	29.55	2.00e-35	145.00
IUUC-Mlu-067458	Myotis lucifugus	26.51	4.00e-40	161.00
IUUC-Nfi-068420	Neosartorya fischeri	29.22	6.00e-43	169.00
IUUC-Nle-070123	Nomascus leucogenys	27.24	5.00e-41	164.00
IUUC-Opr-070543	Ochotona princeps	23.58	7.00e-19	90.90
IUUC-Ont-071658	Oreochromis niloticus	26.94	6.00e-43	171.00
IUUC-Oan-072796	Ornithorhynchus anatinus	26.05	1.00e-14	72.00
IUUC-Ocu-074048	Oryctolagus cuniculus	27.64	3.00e-41	165.00
IUUC-Oba-075826	Oryza barthii	66.73	0.00e+00	3103.00
IUUC-Obr-076145	Oryza brachyantha	66.36	0.00e+00	3074.00
IUUC-Ogu-078307	Oryza glumaepatula	67.15	0.00e+00	3148.00
IUUC-Oin-080118	Oryza indica	67.79	0.00e+00	2043.00
IUUC-Olo-080848	Oryza longistaminata	67.68	0.00e+00	1231.00
IUUC-Oni-082792	Oryza nivara	66.43	0.00e+00	2326.00
IUUC-Opu-084153	Oryza punctata	66.65	0.00e+00	2456.00
IUUC-Oru-084415	Oryza rufipogon	66.08	0.00e+00	2311.00
IUUC-Osa-085332	Oryza sativa	71.63	0.00e+00	865.00
IUUC-Ola-086945	Oryzias latipes	28.99	5.00e-39	157.00
IUUC-Oga-088816	Otolemur garnettii	28.70	3.00e-43	171.00
IUUC-Oar-089618	Ovis aries	30.71	1.00e-38	156.00
IUUC-Ptr-090937	Pan troglodytes	27.19	5.00e-40	160.00
IUUC-Pan-092151	Papio anubis	27.87	3.00e-40	162.00
IUUC-Psi-093590	Pelodiscus sinensis	26.38	1.00e-38	156.00
IUUC-Ppa-095505	Physcomitrella patens	28.35	1.00e-163	571.00
IUUC-Pfo-097445	Poecilia formosa	30.31	1.00e-39	159.00
IUUC-Pab-098237	Pongo abelii	27.07	2.00e-41	165.00
IUUC-Pop-098812	Populus trichocarpa	40.17	0.00e+00	1647.00
IUUC-Pca-101008	Procavia capensis	28.44	1.00e-38	156.00
IUUC-Ppe-101610	Prunus persica	41.45	0.00e+00	1701.00
IUUC-Pva-102348	Pteropus vampyrus	29.69	3.00e-37	152.00
IUUC-Rno-105076	Rattus norvegicus	26.27	4.00e-42	167.00
IUUC-Sha-106860	Sarcophilus harrisii	26.68	7.00e-41	163.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	34.15	2.00e-28	121.00
IUUC-Smo-109573	Selaginella moellendorffii	50.22	8.00e-124	436.00
IUUC-Sit-109981	Setaria italica	77.97	0.00e+00	1729.00
IUUC-Sly-110968	Solanum lycopersicum	38.47	0.00e+00	1563.00
IUUC-Stu-111939	Solanum tuberosum	64.29	5.00e-71	259.00
IUUC-Sar-113751	Sorex araneus	31.15	3.00e-22	102.00
IUUC-Sbi-113768	Sorghum bicolor	95.68	9.00e-103	364.00
IUUC-Ssc-116371	Sus scrofa	26.96	2.00e-42	169.00
IUUC-Tgu-117108	Taeniopygia guttata	28.07	2.00e-37	152.00
IUUC-Tru-117628	Takifugu rubripes	27.26	9.00e-42	167.00
IUUC-Tsy-118837	Tarsius syrichta	26.08	4.00e-37	151.00
IUUC-Tni-120709	Tetraodon nigroviridis	28.40	3.00e-40	161.00
IUUC-Tca-121789	Theobroma cacao	42.05	0.00e+00	1624.00
IUUC-Tae-125726	Triticum aestivum	66.82	0.00e+00	3055.00
IUUC-Tur-126437	Triticum urartu	67.11	5.00e-133	468.00
IUUC-Tbe-127760	Tupaia belangeri	29.29	1.00e-34	142.00
IUUC-Ttr-128991	Tursiops truncatus	31.66	5.00e-39	157.00
IUUC-Vpa-130309	Vicugna pacos	30.97	1.00e-38	156.00
IUUC-Vvi-131584	Vitis vinifera	41.25	0.00e+00	682.00
IUUC-Xtr-132638	Xenopus tropicalis	27.01	1.00e-39	160.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence